Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.16□□□□□ -2.06
IFT140Q96RY7 AC087808.1-201ENST00000520501 361 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 OR4V1P-201ENST00000525394 1140 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 SNORD84-203ENST00000584275 78 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 AC084373.1-201ENST00000603311 235 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
IFT140Q96RY7 RNA5SP363-201ENST00000365072 115 ntBASIC2.15□□□□□ -2.06
IFT140Q96RY7 AC004022.2-201ENST00000413824 193 ntBASIC2.15□□□□□ -2.06
IFT140Q96RY7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.15□□□□□ -2.06
IFT140Q96RY7 LARP7P4-201ENST00000481075 878 ntBASIC2.15□□□□□ -2.06
IFT140Q96RY7 RPS29P20-201ENST00000489592 171 ntBASIC2.15□□□□□ -2.06
IFT140Q96RY7 RPL30P11-201ENST00000495304 339 ntBASIC2.15□□□□□ -2.06
IFT140Q96RY7 OR6C73P-201ENST00000546432 358 ntBASIC2.15□□□□□ -2.06
IFT140Q96RY7 CBX3P2-202ENST00000583365 535 ntBASIC2.15□□□□□ -2.06
IFT140Q96RY7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.06
IFT140Q96RY7 AL390240.1-201ENST00000612950 384 ntBASIC2.15□□□□□ -2.06
IFT140Q96RY7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.15□□□□□ -2.06
IFT140Q96RY7 AP000648.3-201ENST00000623539 4507 ntBASIC2.15□□□□□ -2.07
IFT140Q96RY7 AC096656.1-201ENST00000623826 1364 ntBASIC2.15□□□□□ -2.07
IFT140Q96RY7 Y_RNA.393-201ENST00000383936 102 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 RNU1-139P-201ENST00000391307 165 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 RNU2-71P-201ENST00000411395 189 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.14□□□□□ -2.07
IFT140Q96RY7 SNRPFP3-201ENST00000457792 225 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.14□□□□□ -2.07
IFT140Q96RY7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.14□□□□□ -2.07
IFT140Q96RY7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.14□□□□□ -2.07
IFT140Q96RY7 AC073413.2-201ENST00000604332 360 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 AL391834.1-201ENST00000609609 560 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
IFT140Q96RY7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
IFT140Q96RY7 GTF2IP7-202ENST00000436677 309 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 IPO7P1-201ENST00000442031 636 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 BMI1P1-201ENST00000445879 941 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 AC146507.1-201ENST00000468335 354 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 CDC42P4-201ENST00000510507 563 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.14□□□□□ -2.07
IFT140Q96RY7 AL161912.3-201ENST00000605404 628 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 AC022079.2-201ENST00000619739 566 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 AC095038.3-201ENST00000634439 195 ntBASIC2.14□□□□□ -2.07
IFT140Q96RY7 RNU6-203P-201ENST00000384038 104 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 MIR524-201ENST00000385242 87 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.13□□□□□ -2.07
IFT140Q96RY7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.13□□□□□ -2.07
IFT140Q96RY7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.13□□□□□ -2.07
IFT140Q96RY7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.13□□□□□ -2.07
IFT140Q96RY7 AC022493.1-201ENST00000492984 337 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 ARL2BPP4-201ENST00000506854 471 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 MTCO2P32-201ENST00000514865 403 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 RNA5SP436-201ENST00000516020 115 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 AC019176.1-201ENST00000518519 225 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.13□□□□□ -2.07
IFT140Q96RY7 NBEAP1-201ENST00000554452 979 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.13□□□□□ -2.07
IFT140Q96RY7 AC245128.3-201ENST00000594721 748 ntBASIC2.13□□□□□ -2.07
IFT140Q96RY7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.12□□□□□ -2.07
IFT140Q96RY7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.12□□□□□ -2.07
IFT140Q96RY7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
IFT140Q96RY7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.12□□□□□ -2.07
IFT140Q96RY7 ELOCP11-201ENST00000436690 332 ntBASIC2.12□□□□□ -2.07
IFT140Q96RY7 ELOCP16-201ENST00000444494 332 ntBASIC2.12□□□□□ -2.07
IFT140Q96RY7 AC113155.1-201ENST00000511141 769 ntBASIC2.12□□□□□ -2.07
IFT140Q96RY7 AC008837.2-201ENST00000513076 418 ntBASIC2.12□□□□□ -2.07
IFT140Q96RY7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
IFT140Q96RY7 MTCO1P47-201ENST00000523889 1271 ntBASIC2.12□□□□□ -2.07
IFT140Q96RY7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.12□□□□□ -2.07
IFT140Q96RY7 AL133507.1-201ENST00000605269 557 ntBASIC2.12□□□□□ -2.07
IFT140Q96RY7 AC106028.5-201ENST00000610332 395 ntBASIC2.12□□□□□ -2.07
IFT140Q96RY7 AL356118.1-201ENST00000635272 1078 ntBASIC2.12□□□□□ -2.07
IFT140Q96RY7 AL161722.3-201ENST00000605789 2983 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 HMGB1P5-201ENST00000255320 642 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 SNORA7.2-201ENST00000364446 145 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 MIR320B1-201ENST00000390209 79 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.11□□□□□ -2.07
IFT140Q96RY7 AC241520.1-201ENST00000422654 1099 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.11□□□□□ -2.07
IFT140Q96RY7 ARL5AP2-201ENST00000444698 533 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 NF1P3-201ENST00000457709 450 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 RNU1-61P-201ENST00000516107 151 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.11□□□□□ -2.07
IFT140Q96RY7 RPL21P5-201ENST00000554662 472 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 CENPUP2-201ENST00000555897 1186 ntBASIC2.11□□□□□ -2.07
IFT140Q96RY7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.11□□□□□ -2.07
IFT140Q96RY7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.11□□□□□ -2.07
IFT140Q96RY7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.11□□□□□ -2.07
IFT140Q96RY7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.1□□□□□ -2.07
IFT140Q96RY7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
IFT140Q96RY7 RNU6-1077P-201ENST00000410506 102 ntBASIC2.1□□□□□ -2.07
IFT140Q96RY7 AC244033.1-201ENST00000426826 870 ntBASIC2.1□□□□□ -2.07
IFT140Q96RY7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.1□□□□□ -2.07
IFT140Q96RY7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
IFT140Q96RY7 AC110792.2-201ENST00000510278 224 ntBASIC2.1□□□□□ -2.07
IFT140Q96RY7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.1□□□□□ -2.07
IFT140Q96RY7 ANP32BP3-201ENST00000559213 706 ntBASIC2.1□□□□□ -2.07
IFT140Q96RY7 MIR5000-201ENST00000577717 103 ntBASIC2.1□□□□□ -2.07
IFT140Q96RY7 AC113194.1-201ENST00000606037 500 ntBASIC2.1□□□□□ -2.07
IFT140Q96RY7 AC008083.4-201ENST00000615076 444 ntBASIC2.1□□□□□ -2.07
IFT140Q96RY7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms