Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 RNU6-430P-201ENST00000517078 107 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 MTCO2P4-201ENST00000517968 247 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 HMGB1P41-201ENST00000520234 440 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 CASP1P1-201ENST00000526345 212 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AP003392.2-201ENST00000527269 208 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 TRAV28-201ENST00000557548 323 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 MIR3167-201ENST00000579623 85 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC098614.4-201ENST00000607601 462 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC103591.3-201ENST00000608684 209 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC091834.1-201ENST00000614543 472 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC079684.1-201ENST00000621405 437 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC007998.5-201ENST00000622938 237 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 LARP1BP1-201ENST00000506036 1359 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 CR848007.1-201ENST00000442354 1699 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RNU5A-6P-201ENST00000384136 116 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 MIR585-201ENST00000384887 94 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RNA5SP424-201ENST00000390988 115 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RPS4XP9-201ENST00000405151 780 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RNU2-33P-201ENST00000410344 192 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RNU2-16P-201ENST00000410712 136 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 Z85995.1-201ENST00000415547 335 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 MTND3P17-201ENST00000416968 344 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 SDCBPP3-201ENST00000419629 891 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC133104.1-201ENST00000429100 218 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 PIGFP3-201ENST00000441918 722 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RNU6-953P-201ENST00000459154 107 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC087588.1-201ENST00000462203 316 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 KC877373.1-201ENST00000479066 408 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC105137.1-201ENST00000484355 562 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AL160314.1-201ENST00000490836 438 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RN7SL604P-201ENST00000492589 296 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC006445.2-201ENST00000510061 472 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC010493.1-201ENST00000513479 292 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RNU6-405P-201ENST00000516637 110 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 RNA5SP179-201ENST00000517284 121 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 YPEL5P3-201ENST00000547227 352 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 HMGB1P14-201ENST00000557424 591 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 MIR3609-201ENST00000582661 80 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 MIR4506-201ENST00000584693 77 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 GLUD1P4-201ENST00000590914 418 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AP002360.4-201ENST00000606980 481 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 MIR6868-201ENST00000611215 58 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC022336.2-201ENST00000568966 2538 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC110774.1-201ENST00000623567 2018 ntBASIC3.41□□□□□ -1.86
NR1H4Q96RI1 AC008264.2-201ENST00000610193 3731 ntBASIC3.4□□□□□ -1.86
NR1H4Q96RI1 RNU6-960P-201ENST00000364056 120 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 RNU6-641P-201ENST00000384006 107 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC108032.1-201ENST00000416706 207 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC104651.1-201ENST00000427559 735 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 MED13P1-201ENST00000428342 171 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 BTF3P10-201ENST00000433415 495 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 GPR143P-201ENST00000434155 205 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AL031667.1-201ENST00000440222 725 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 UQCRHP4-201ENST00000471686 272 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC006483.1-201ENST00000487308 313 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 RNU2-27P-201ENST00000516185 142 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 RN7SKP21-201ENST00000516503 220 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 RNA5SP290-201ENST00000517133 127 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms