Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 AC125611.2-201ENST00000551907 647 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 RNU4-89P-201ENST00000607443 133 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 TUG1_2.1-201ENST00000614234 87 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 AC009233.1-201ENST00000616477 371 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNX18Q96RF0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX18Q96RF0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC066616.2-201ENST00000559334 1481 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 RNU1-14P-201ENST00000362759 152 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNX18Q96RF0 SNORD3H-201ENST00000384486 214 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 HMGN2P8-201ENST00000391458 268 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AL356432.1-201ENST00000405809 419 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 RNU2-43P-201ENST00000410306 190 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC099677.1-201ENST00000420575 175 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AL353678.1-201ENST00000422735 741 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 RPL35AP12-201ENST00000425362 338 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 DUTP6-201ENST00000425573 462 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC008850.1-201ENST00000427546 362 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC093106.2-201ENST00000428212 385 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 SRIP2-201ENST00000428470 166 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC004866.2-201ENST00000438285 481 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 RPL23AP52-201ENST00000439311 478 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 NUTF2P3-201ENST00000448540 384 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 MTND3P16-201ENST00000452205 344 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 AL136097.1-201ENST00000456945 913 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 RNU7-170P-201ENST00000459303 61 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC092436.1-201ENST00000506450 503 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 RNU4-29P-201ENST00000515943 174 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 RN7SKP219-201ENST00000516825 296 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC018630.1-201ENST00000541376 925 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNX18Q96RF0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 MIR4775-201ENST00000581168 75 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC013553.2-201ENST00000604244 589 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AL450472.3-201ENST00000615578 367 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AL713922.2-201ENST00000619384 716 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC009248.2-201ENST00000619826 254 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 AC079684.1-201ENST00000621405 437 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 FRG1KP-201ENST00000623592 341 ntBASIC3.76□□□□□ -1.81
SNX18Q96RF0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNX18Q96RF0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX18Q96RF0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC004972.1-201ENST00000623934 2209 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 AL645937.1-201ENST00000641739 1652 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC006026.1-201ENST00000444025 1803 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX18Q96RF0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC073343.1-201ENST00000328239 651 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 U3.15-201ENST00000365398 212 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 RNU5E-6P-201ENST00000365574 115 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 RNU4-20P-201ENST00000365601 151 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX18Q96RF0 RNU6-1029P-201ENST00000384109 107 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 RNU6-1011P-201ENST00000384668 107 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 RNU6-1148P-201ENST00000410992 104 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC007390.1-201ENST00000415722 356 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 MTND1P18-201ENST00000448191 573 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 SNORD97-201ENST00000459187 142 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 SNORD108-201ENST00000459332 71 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC008481.1-201ENST00000463278 396 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 RN7SL691P-201ENST00000494487 301 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC107953.1-201ENST00000522216 297 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC022690.1-201ENST00000526681 550 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX18Q96RF0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX18Q96RF0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX18Q96RF0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
SNX18Q96RF0 MIR4795-201ENST00000584182 89 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 MIR3138-201ENST00000585238 82 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC130324.3-201ENST00000614165 542 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 AC093913.1-201ENST00000614178 329 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 SNHG22-203ENST00000617833 660 ntBASIC3.75□□□□□ -1.81
SNX18Q96RF0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms