Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AP003497.1-201ENST00000528472 562 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AL355836.1-201ENST00000555951 870 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 YWHAZP1-201ENST00000556286 722 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC005951.2-201ENST00000576282 495 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 MIR5194-201ENST00000582634 120 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AL353997.4-201ENST00000586196 166 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 DUXAP3-201ENST00000603616 594 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC069431.2-201ENST00000604149 1099 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC010297.1-201ENST00000623948 149 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AL049641.1-201ENST00000441055 1948 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AL136360.1-201ENST00000503377 1900 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC007785.2-201ENST00000598627 1916 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 RNU6-359P-201ENST00000365466 108 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 RNU6-413P-201ENST00000384115 107 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 RNU6-1207P-201ENST00000384343 107 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 RPS4XP8-201ENST00000402039 771 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AL714022.1-201ENST00000439897 151 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AC011816.1-201ENST00000441346 546 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AL109741.2-201ENST00000455561 343 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AC116337.2-201ENST00000477662 156 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 HMGB1P36-201ENST00000487709 576 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 RNA5SP282-201ENST00000516355 108 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 SNORA31.15-201ENST00000516771 132 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 MIR3162-201ENST00000581818 82 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AC021749.1-201ENST00000604322 607 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AF129408.1-201ENST00000608767 431 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AC103710.4-201ENST00000609301 899 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AC073308.1-201ENST00000623696 305 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.68□□□□□ -1.98
RPRD1AQ96P16 AL390862.1-201ENST00000635467 1469 ntBASIC2.68□□□□□ -1.98
RPRD1AQ96P16 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 RNU6-1078P-201ENST00000364522 103 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 RNU6-621P-201ENST00000364752 109 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 RNU6-193P-201ENST00000410977 107 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 USP9YP20-201ENST00000419224 558 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC099548.1-201ENST00000421443 426 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC009414.1-201ENST00000427200 443 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC008850.1-201ENST00000427546 362 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 RPL36AP6-201ENST00000435770 321 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 ARPC3P1-201ENST00000437218 533 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 BMI1P1-201ENST00000445879 941 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 MTND2P24-201ENST00000453434 806 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AP000705.1-201ENST00000454567 350 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC092155.2-201ENST00000454675 477 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC073901.1-201ENST00000462471 408 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 SRIP1-201ENST00000489235 288 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 RPS27P26-201ENST00000494583 239 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 CDC42P4-201ENST00000510507 563 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 OR5BM1P-201ENST00000512021 366 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 HMGB1P41-201ENST00000520234 440 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AP002748.2-201ENST00000528671 348 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 OR4K7P-201ENST00000580232 945 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 AC131235.4-201ENST00000609288 620 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.67□□□□□ -1.98
RPRD1AQ96P16 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPRD1AQ96P16 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AL161781.1-201ENST00000354277 403 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms