Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CYCSP34-201ENST00000458172 304 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 RPL37P6-201ENST00000460682 294 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC015911.1-201ENST00000495111 156 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 SCARNA22-201ENST00000503991 125 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 SNORA31.3-201ENST00000516029 96 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC090151.1-201ENST00000520784 730 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC008489.1-201ENST00000524271 483 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC110588.1-201ENST00000559699 137 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 Z69720.2-201ENST00000624755 279 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC119674.1-207ENST00000641355 633 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC027290.2-201ENST00000623210 18662 ntBASIC4.46□□□□□ -1.69
PTCHD1Q96NR3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTCHD1Q96NR3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.46□□□□□ -1.69
PTCHD1Q96NR3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 RNU6-490P-201ENST00000362985 107 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 Y_RNA.193-201ENST00000363979 102 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 RNU6-505P-201ENST00000384427 107 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 HMGB3P2-201ENST00000411913 584 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AL645608.4-201ENST00000423619 154 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AC004938.1-201ENST00000438468 308 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 GSTA11P-201ENST00000452866 669 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 IGLV2-34-201ENST00000490007 283 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 RNU6-699P-201ENST00000517081 110 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 BNIP3P5-201ENST00000562290 498 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AC090425.1-201ENST00000610007 140 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AL161423.1-201ENST00000613700 262 ntBASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD1Q96NR3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC026951.1-201ENST00000559530 2459 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AL590240.1-201ENST00000334118 313 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 Y_RNA.47-201ENST00000362697 108 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 RNU6-266P-201ENST00000364225 107 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 Y_RNA.496-201ENST00000384444 101 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 RNU6-907P-201ENST00000390924 102 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 RNU6-882P-201ENST00000391025 103 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 HSPE1P8-201ENST00000406997 288 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 MIR1302-3-201ENST00000408128 138 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 RNU6-293P-201ENST00000411259 106 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 EIF4HP2-201ENST00000424380 563 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC008267.5-201ENST00000424928 265 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 USMG5P1-201ENST00000425964 177 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC096644.2-201ENST00000429278 159 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AL731563.1-201ENST00000442202 214 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 SNORD5.1-201ENST00000458800 75 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC084198.1-201ENST00000477747 402 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 SNORA31.22-201ENST00000517204 135 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 CDH12P4-201ENST00000517835 295 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 CDH12P3-201ENST00000517935 295 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 CDH12P1-201ENST00000518435 295 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 IGKV1-32-201ENST00000519290 311 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 RN7SL652P-201ENST00000577769 300 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC011494.1-201ENST00000596454 237 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 AC002044.1-201ENST00000606707 158 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms