Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNA5SP471-201ENST00000516971 106 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 DUXAP2-201ENST00000519198 589 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 MIR3913-1-201ENST00000577744 102 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AL161798.1-201ENST00000604630 131 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AC004832.5-201ENST00000608677 401 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 FTX_3.1-201ENST00000610451 147 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AC100793.4-201ENST00000613683 429 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AP003122.6-201ENST00000623831 495 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 GABRG2-229ENST00000641017 3628 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 FTLP6-201ENST00000355274 422 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RNU6-188P-201ENST00000364207 107 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RNA5SP366-201ENST00000365454 123 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RNU6-946P-201ENST00000383878 107 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 BTF3L4P1-201ENST00000413813 468 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 PIGFP2-201ENST00000421400 651 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC099548.1-201ENST00000421443 426 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC093106.2-201ENST00000428212 385 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RPL31P35-201ENST00000431058 377 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 PRDX3P3-201ENST00000447765 522 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 NUTF2P3-201ENST00000448540 384 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 MRPS31P2-201ENST00000451581 518 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RNU6-953P-201ENST00000459154 107 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 KLF3P2-201ENST00000465138 268 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RPS23P7-201ENST00000466210 444 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RN7SL303P-201ENST00000469773 251 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC004924.1-201ENST00000480160 781 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC007182.2-201ENST00000489251 402 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 APOOP4-201ENST00000513530 597 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RNA5SP179-201ENST00000517284 121 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 RAB9BP1-201ENST00000519581 626 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC008011.1-201ENST00000545989 227 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC024909.2-201ENST00000553035 286 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC037471.2-201ENST00000564941 598 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC012213.3-201ENST00000577199 777 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 MIR4277-201ENST00000578298 84 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 MIR3611-201ENST00000584484 83 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC174048.1-201ENST00000603389 144 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC091167.4-201ENST00000605079 184 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 AC107294.1-201ENST00000609524 467 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CMTM3Q96MX0 MTND5P29-201ENST00000458676 1807 ntBASIC3.25□□□□□ -1.89
CMTM3Q96MX0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC010680.1-201ENST00000590024 3590 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 RNA5SP424-201ENST00000390988 115 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 DEFB108C-201ENST00000400154 252 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC007899.1-201ENST00000412776 775 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 MED13P1-201ENST00000428342 171 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 RPS4XP22-201ENST00000480755 780 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC138853.1-201ENST00000503549 823 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 RNU6-1220P-201ENST00000517126 108 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC090572.1-201ENST00000519251 160 ntBASIC3.24□□□□□ -1.89
CMTM3Q96MX0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.24□□□□□ -1.89
CMTM3Q96MX0 MIR5096-201ENST00000583713 70 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms