Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 USP9YP27-201ENST00000418455 438 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AL139413.1-201ENST00000421309 217 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC006548.1-201ENST00000427470 102 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 RPL23AP20-201ENST00000447965 421 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC104308.1-201ENST00000454621 333 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC023194.1-201ENST00000493084 308 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC020893.1-201ENST00000502452 580 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 FTH1P9-201ENST00000513251 355 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 SNORA70.19-201ENST00000516717 90 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 NARSP2-201ENST00000518524 679 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 OR4P1P-201ENST00000530808 1136 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AP000907.2-201ENST00000530827 353 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC012507.3-201ENST00000603556 477 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC007363.1-201ENST00000604736 620 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AC004853.1-201ENST00000604902 698 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 AL136363.1-201ENST00000605349 337 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 HMGB1P50-201ENST00000605814 607 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 CR381572.1-201ENST00000625098 102 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 CASC19-280ENST00000642102 1351 ntBASIC3.99□□□□□ -1.77
CCDC17Q96LX7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC17Q96LX7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC073073.2-201ENST00000609827 2578 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 RNU6-97P-201ENST00000363387 104 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 SNORA38.1-201ENST00000364172 131 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 RPS15AP9-201ENST00000439856 381 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 MTCO3P18-201ENST00000440206 761 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 MTND5P20-201ENST00000448677 143 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 SNRPGP5-201ENST00000456003 220 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 snoU13.8-201ENST00000458890 104 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 OR5H5P-201ENST00000503164 928 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC110794.1-201ENST00000505816 425 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 SNORA74D-201ENST00000516404 141 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 RNU6-358P-201ENST00000516564 75 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 SNORA20.3-201ENST00000516880 132 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC022790.1-201ENST00000522872 204 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC022616.3-201ENST00000523940 148 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC109635.3-201ENST00000529536 185 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 SUB1P2-201ENST00000556401 297 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 MIR3146-201ENST00000580367 79 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 MIR3200-201ENST00000580767 85 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC091135.1-201ENST00000585943 307 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC008752.3-201ENST00000588113 712 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC007566.2-201ENST00000603642 413 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 AC091925.2-201ENST00000625059 256 ntBASIC3.98□□□□□ -1.77
CCDC17Q96LX7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC17Q96LX7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC17Q96LX7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC17Q96LX7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC17Q96LX7 RNVU1-3-201ENST00000364313 161 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 MIR23A-201ENST00000385245 73 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 RPS3AP24-201ENST00000407896 734 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 HMGN1P24-201ENST00000412282 298 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 OR51AB1P-201ENST00000429046 620 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC17Q96LX7 USP9YP15-201ENST00000442391 422 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC17Q96LX7 RNU6-420P-201ENST00000458780 107 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 snoU13.24-201ENST00000458998 104 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 AC021382.1-201ENST00000483523 359 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 AC114781.4-201ENST00000513707 639 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC17Q96LX7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC17Q96LX7 RNU6-27P-201ENST00000516146 107 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 RNU6-528P-201ENST00000516926 100 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 RN7SKP57-201ENST00000517248 293 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC17Q96LX7 AC104383.1-201ENST00000530297 370 ntBASIC3.97□□□□□ -1.77
CCDC17Q96LX7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms