Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AL445435.1-201ENST00000604232 665 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC124016.2-201ENST00000610058 665 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC084757.4-201ENST00000616350 526 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 U4atac.1-201ENST00000618345 95 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.74□□□□□ -1.97
PKNOX2Q96KN3 Z99496.1-201ENST00000469424 1477 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 ANKRD36P1-201ENST00000344424 659 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 RNA5SP37-201ENST00000365420 130 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 MIR449B-201ENST00000384995 97 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 RNU2-43P-201ENST00000410306 190 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC096649.2-201ENST00000416186 393 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 MTCO1P3-201ENST00000429327 192 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 HMGN1P5-201ENST00000448591 263 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 OR4G11P-201ENST00000492842 939 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 DUXAP2-201ENST00000519198 589 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 OR5AK1P-201ENST00000524837 922 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 BNIP3P24-201ENST00000593398 557 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC008739.3-201ENST00000603262 127 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC008498.1-201ENST00000613012 531 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC090132.2-201ENST00000615881 347 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AL512427.1-201ENST00000618593 349 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 MIR7975-201ENST00000619350 68 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 U6.101-201ENST00000637707 76 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 MKKS-204ENST00000639674 192 ntBASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
PKNOX2Q96KN3 AC109315.1-201ENST00000584143 1347 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 OR4G2P-202ENST00000641004 1759 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 OR56A5-201ENST00000340110 738 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 MIRLET7G-201ENST00000362280 84 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC023141.4-201ENST00000412031 328 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 USP9YP21-201ENST00000420603 432 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 C1DP1-201ENST00000426049 402 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 RPL23AP83-201ENST00000434984 473 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AP000949.1-201ENST00000438328 629 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AL049734.2-201ENST00000441066 616 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC112492.1-201ENST00000449607 712 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC079776.3-201ENST00000450665 370 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 HMGB3P17-201ENST00000504195 649 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC109464.2-201ENST00000510242 943 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 DEFB130C-202ENST00000530001 230 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC125611.1-201ENST00000549563 229 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 SETP7-201ENST00000552169 453 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AL133241.1-201ENST00000556832 487 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC138915.2-201ENST00000569776 97 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 MIR5708-201ENST00000579723 85 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 MIR3158-1-201ENST00000583596 81 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AL161729.4-201ENST00000604650 476 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC080013.4-201ENST00000607624 649 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC007038.2-201ENST00000608095 740 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC006133.1-201ENST00000617106 264 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 AP006437.1-201ENST00000641440 3685 ntBASIC2.72□□□□□ -1.97
PKNOX2Q96KN3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PKNOX2Q96KN3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 Y_RNA.25-201ENST00000362528 102 ntBASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 MIR676-201ENST00000390702 67 ntBASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 MTCO1P56-201ENST00000401674 224 ntBASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 PIGFP3-201ENST00000441918 722 ntBASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 CACYBPP2-201ENST00000453625 678 ntBASIC2.71□□□□□ -1.98
PKNOX2Q96KN3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms