Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RFC5P1-201ENST00000454419 874 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 KLRA1P-201ENST00000503499 986 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 AC093801.2-201ENST00000503966 1050 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 NAMPTP2-201ENST00000505629 1115 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.81□□□□□ -1.96
USP47Q96K76 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
USP47Q96K76 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USP47Q96K76 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.81□□□□□ -1.96
USP47Q96K76 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.81□□□□□ -1.96
USP47Q96K76 AMZ2P1-203ENST00000565833 850 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 AC023825.1-201ENST00000566704 1030 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 SNRPGP19-201ENST00000603826 189 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 AC009314.1-201ENST00000603871 304 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 AL445435.1-201ENST00000604232 665 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 AL158211.2-201ENST00000607282 395 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 AC087821.2-201ENST00000637086 450 ntBASIC2.81□□□□□ -1.96
USP47Q96K76 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.81□□□□□ -1.96
USP47Q96K76 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
USP47Q96K76 AL513185.3-201ENST00000433335 1300 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USP47Q96K76 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 SNORA63.3-201ENST00000362682 132 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 SUGT1P1-201ENST00000379514 476 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 RNU6-1140P-201ENST00000410517 106 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 SEPT7P5-201ENST00000434048 306 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 AC093155.1-201ENST00000440164 826 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
USP47Q96K76 AC093392.2-201ENST00000450682 337 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.8□□□□□ -1.96
USP47Q96K76 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.8□□□□□ -1.96
USP47Q96K76 Z82190.1-201ENST00000454534 490 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 AC025033.1-201ENST00000463883 194 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 AC010460.2-201ENST00000509054 677 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 MTCO3P27-201ENST00000514397 196 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 SNORA31.15-201ENST00000516771 132 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.8□□□□□ -1.96
USP47Q96K76 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.8□□□□□ -1.96
USP47Q96K76 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.8□□□□□ -1.96
USP47Q96K76 MIR5089-201ENST00000580047 84 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.8□□□□□ -1.96
USP47Q96K76 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.8□□□□□ -1.96
USP47Q96K76 VN1R87P-201ENST00000596706 487 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 MIR6076-201ENST00000617521 113 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 AL356585.4-201ENST00000623078 1229 ntBASIC2.8□□□□□ -1.96
USP47Q96K76 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
USP47Q96K76 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USP47Q96K76 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USP47Q96K76 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USP47Q96K76 SNORA14A-201ENST00000364773 135 ntBASIC2.79□□□□□ -1.96
USP47Q96K76 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USP47Q96K76 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.79□□□□□ -1.96
USP47Q96K76 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.79□□□□□ -1.96
USP47Q96K76 AC027124.2-201ENST00000428249 105 ntBASIC2.79□□□□□ -1.96
USP47Q96K76 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.79□□□□□ -1.96
USP47Q96K76 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.79□□□□□ -1.96
USP47Q96K76 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.79□□□□□ -1.96
USP47Q96K76 AC109486.1-201ENST00000486833 374 ntBASIC2.79□□□□□ -1.96
USP47Q96K76 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.79□□□□□ -1.96
USP47Q96K76 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.79□□□□□ -1.96
USP47Q96K76 AC104417.1-201ENST00000523974 751 ntBASIC2.79□□□□□ -1.96
USP47Q96K76 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.79□□□□□ -1.96
USP47Q96K76 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.79□□□□□ -1.96
USP47Q96K76 AL592148.2-201ENST00000612210 372 ntBASIC2.79□□□□□ -1.96
USP47Q96K76 AC034102.8-201ENST00000615146 484 ntBASIC2.79□□□□□ -1.96
USP47Q96K76 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.79□□□□□ -1.96
USP47Q96K76 U6.101-201ENST00000637707 76 ntBASIC2.79□□□□□ -1.96
USP47Q96K76 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USP47Q96K76 AC090740.1-201ENST00000623193 2262 ntBASIC2.79□□□□□ -1.96
USP47Q96K76 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
USP47Q96K76 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
USP47Q96K76 RNU1-17P-201ENST00000363022 152 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 RNU5D-1-201ENST00000363299 116 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 RNU6-1155P-201ENST00000363554 107 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 CD24P4-201ENST00000382840 243 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 RNA5SP213-201ENST00000391031 106 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 RPS4XP3-201ENST00000398541 413 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 RPL7P27-201ENST00000403775 720 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.78□□□□□ -1.96
USP47Q96K76 AC013262.1-201ENST00000426710 252 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 WARS2P1-201ENST00000429678 537 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.78□□□□□ -1.96
USP47Q96K76 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.78□□□□□ -1.96
USP47Q96K76 RAC1P7-201ENST00000445367 377 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.78□□□□□ -1.96
USP47Q96K76 USP9YP34-201ENST00000453983 808 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 RPL30P14-201ENST00000482744 348 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 COX7A2P2-201ENST00000505291 250 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 OR5AK1P-201ENST00000524837 922 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 AC239860.2-201ENST00000525886 270 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 MTCO3P15-201ENST00000526563 574 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 RPS3AP23-202ENST00000574601 686 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.78□□□□□ -1.96
USP47Q96K76 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.78□□□□□ -1.96
USP47Q96K76 AC012443.1-201ENST00000605605 231 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 AL157770.1-201ENST00000623049 439 ntBASIC2.78□□□□□ -1.96
USP47Q96K76 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.78□□□□□ -1.96
USP47Q96K76 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.78□□□□□ -1.96
USP47Q96K76 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.97
USP47Q96K76 AL136520.1-201ENST00000600311 1322 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms