Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC011611.1-201ENST00000552179 197 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AMZ2P1-203ENST00000565833 850 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC103987.3-201ENST00000582071 292 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC073114.1-201ENST00000612027 490 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC006133.1-201ENST00000617106 264 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AC006927.3-201ENST00000638789 384 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AL138713.1-201ENST00000624026 2130 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.14□□□□□ -1.91
PDLIM5Q96HC4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 RNU1-105P-201ENST00000363470 161 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 RNU4-24P-201ENST00000364565 139 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 MIR325-201ENST00000385260 98 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 Z85995.1-201ENST00000415547 335 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AL512649.1-201ENST00000428997 581 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AL353705.1-201ENST00000433468 480 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 UBE2FP3-201ENST00000436366 524 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 LSM1P1-201ENST00000438629 273 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 EPS15P1-201ENST00000448836 336 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 HMGB1P36-201ENST00000487709 576 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AP002812.1-201ENST00000495378 474 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC093809.1-201ENST00000509155 340 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 SNORA31.21-201ENST00000517180 77 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC060788.1-201ENST00000521318 469 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AP002748.2-201ENST00000528671 348 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 CCNG2P1-201ENST00000549521 1000 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC012414.6-201ENST00000568241 401 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC119751.7-201ENST00000600494 245 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC245389.1-201ENST00000605141 529 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AL158063.1-201ENST00000615349 536 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AL356266.1-201ENST00000623311 483 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 FAM35CP-201ENST00000554755 2470 ntBASIC3.13□□□□□ -1.91
PDLIM5Q96HC4 AC009902.3-201ENST00000606235 2172 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 U3.6-201ENST00000363622 211 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 RNA5SP354-201ENST00000391247 136 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 RN7SKP266-201ENST00000410232 287 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 CYCSP46-201ENST00000423569 204 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 MTND1P30-201ENST00000441241 901 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 RPS12P18-201ENST00000442381 270 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 CBWD4P-201ENST00000445695 655 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 MTCO1P27-201ENST00000448269 226 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 RPL21P10-201ENST00000463521 490 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AL672167.3-201ENST00000465951 960 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 TTC39CP1-201ENST00000512513 755 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 RNU6-928P-201ENST00000516876 104 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 DUXAP2-201ENST00000519198 589 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC024909.2-201ENST00000553035 286 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 TRAV37-201ENST00000553906 342 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms