Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SNORA33.2-201ENST00000365413 134 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 RNU4-48P-201ENST00000365559 182 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC069218.2-201ENST00000411665 344 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 BX323014.1-201ENST00000412876 237 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 HSPE1P1-201ENST00000421494 318 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AL391219.1-201ENST00000422570 483 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DDX11Q96FC9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 ERLEC1P1-201ENST00000433806 578 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 TIMM9P1-201ENST00000436122 256 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC006011.1-201ENST00000442758 349 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 BX276092.4-201ENST00000452056 248 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 Y_RNA.631-201ENST00000459607 101 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AP001992.1-205ENST00000462248 379 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 RPL21P103-201ENST00000479921 488 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 RPS26P15-201ENST00000488067 348 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC004062.1-201ENST00000509926 645 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC105417.1-201ENST00000514691 285 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC093853.1-201ENST00000515689 483 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 MIR4429-201ENST00000580105 73 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 uc_338.12-201ENST00000616344 181 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 AC138305.3-201ENST00000624988 240 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DDX11Q96FC9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX11Q96FC9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 OR1S2-201ENST00000302592 978 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 Y_RNA.100-201ENST00000363141 102 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 Y_RNA.146-201ENST00000363549 102 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 Y_RNA.202-201ENST00000364083 110 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 SNORA70E-201ENST00000384492 135 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 MIR153-1-201ENST00000384914 90 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 RPL5P18-201ENST00000406671 891 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 RNA5SP306-201ENST00000411087 107 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 AL451054.2-201ENST00000420896 202 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 RPL7L1P10-201ENST00000427790 463 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 OR4K11P-201ENST00000431829 904 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 PPP1R2P5-201ENST00000457256 603 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 RNA5SP246-201ENST00000458909 119 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 RN7SL542P-201ENST00000467147 294 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 VN1R105P-201ENST00000486595 910 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 Y_RNA.665-201ENST00000516177 98 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 RN7SKP277-201ENST00000516895 283 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 Y_RNA.711-201ENST00000516993 102 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 RNU1-45P-201ENST00000517191 141 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 IGLVIV-53-201ENST00000520107 367 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 AC053481.3-201ENST00000577881 843 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 OR4K8P-201ENST00000578842 1048 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 RPL23AP92-201ENST00000603609 255 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 AL022345.1-201ENST00000607292 135 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 OR6R2P-201ENST00000609216 300 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 AC103710.2-201ENST00000609912 942 ntBASIC4.8□□□□□ -1.64
DDX11Q96FC9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX11Q96FC9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX11Q96FC9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX11Q96FC9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX11Q96FC9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.79□□□□□ -1.64
DDX11Q96FC9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms