Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPL23AP65-201ENST00000475608 468 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 AC068522.1-201ENST00000482895 345 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-CQ95604 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-CQ95604 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 AC091953.5-201ENST00000622919 233 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 SCARNA4-201ENST00000629045 128 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-CQ95604 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-CQ95604 NCAPGP1-201ENST00000505112 1814 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HLA-CQ95604 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-CQ95604 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-CQ95604 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-CQ95604 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-CQ95604 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-CQ95604 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-CQ95604 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-CQ95604 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-CQ95604 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-CQ95604 Y_RNA.123-201ENST00000363338 102 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 Y_RNA.441-201ENST00000384123 112 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 RNU6-178P-201ENST00000384631 104 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 AP003170.5-201ENST00000397185 335 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 LAP3P1-201ENST00000403648 294 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-CQ95604 OR2AM1P-201ENST00000422137 422 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-CQ95604 RPL12P46-201ENST00000436610 195 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-CQ95604 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-CQ95604 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-CQ95604 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-CQ95604 MIR4301-201ENST00000577203 66 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-CQ95604 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-CQ95604 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-CQ95604 AL365265.1-201ENST00000621045 234 ntBASIC5.7□□□□□ -1.5
HLA-CQ95604 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-CQ95604 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-CQ95604 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-CQ95604 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HLA-CQ95604 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-CQ95604 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-CQ95604 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-CQ95604 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-CQ95604 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-CQ95604 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HLA-CQ95604 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-CQ95604 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 AP000432.2-201ENST00000624164 2048 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-CQ95604 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HLA-CQ95604 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-CQ95604 BX322639.1-202ENST00000423987 2213 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-CQ95604 SNORD115-32-201ENST00000364079 82 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 RNA5SP505-201ENST00000364748 108 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
HLA-CQ95604 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-CQ95604 BTF3L4P2-201ENST00000392798 346 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-CQ95604 RPS20P1-201ENST00000434853 354 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 FABP5P15-201ENST00000453566 214 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-CQ95604 AC010326.1-201ENST00000462726 602 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-CQ95604 OR7H2P-201ENST00000513483 306 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 RNU6-377P-201ENST00000515965 102 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 RNU6-313P-201ENST00000516317 112 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 AP005660.1-201ENST00000522972 293 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-CQ95604 AP006289.1-201ENST00000538089 277 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 MIR4423-201ENST00000580922 80 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 AL078605.1-201ENST00000603529 500 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-CQ95604 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HLA-CQ95604 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-CQ95604 AC009779.8-201ENST00000641684 4384 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-CQ95604 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-CQ95604 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 MFSD8-216ENST00000641147 4009 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 AC022905.1-201ENST00000503430 3048 ntBASIC5.69□□□□□ -1.5
HLA-CQ95604 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
HLA-CQ95604 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-CQ95604 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
HLA-CQ95604 LINC01109-201ENST00000603837 3081 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HLA-CQ95604 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HLA-CQ95604 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HLA-CQ95604 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-CQ95604 AC062029.1-202ENST00000606164 3651 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms