Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC103710.2-202ENST00000641454 2853 ntBASIC1.12□□□□□ -2.23
USP9XQ93008 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.12□□□□□ -2.23
USP9XQ93008 XIAPP3-201ENST00000312918 795 ntBASIC1.12□□□□□ -2.23
USP9XQ93008 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.12□□□□□ -2.23
USP9XQ93008 RPL35AP22-201ENST00000436855 335 ntBASIC1.12□□□□□ -2.23
USP9XQ93008 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.12□□□□□ -2.23
USP9XQ93008 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.12□□□□□ -2.23
USP9XQ93008 SNORA31.26-201ENST00000517250 137 ntBASIC1.12□□□□□ -2.23
USP9XQ93008 AC233266.2-201ENST00000567067 528 ntBASIC1.12□□□□□ -2.23
USP9XQ93008 AC009127.3-201ENST00000570531 403 ntBASIC1.12□□□□□ -2.23
USP9XQ93008 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.12□□□□□ -2.23
USP9XQ93008 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
USP9XQ93008 RNU2-25P-201ENST00000411041 191 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 AC019070.1-201ENST00000415008 1024 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 USP9YP7-201ENST00000436723 430 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 USP9YP32-201ENST00000452432 430 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 AC008427.1-201ENST00000503102 655 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 AL391261.3-201ENST00000557194 520 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 AC006270.2-201ENST00000578523 652 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 AC073413.2-201ENST00000604332 360 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
USP9XQ93008 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
USP9XQ93008 MIR1912-201ENST00000410389 80 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 CR848007.2-201ENST00000424918 787 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.11□□□□□ -2.23
USP9XQ93008 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.11□□□□□ -2.23
USP9XQ93008 DUXAP3-201ENST00000603616 594 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 AL356118.1-201ENST00000635272 1078 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 AC121333.1-201ENST00000567488 2709 ntBASIC1.11□□□□□ -2.23
USP9XQ93008 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
USP9XQ93008 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
USP9XQ93008 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.1□□□□□ -2.23
USP9XQ93008 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.1□□□□□ -2.23
USP9XQ93008 NDUFS5P3-201ENST00000450668 321 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 AC023790.1-201ENST00000482174 347 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.1□□□□□ -2.23
USP9XQ93008 AC104115.2-201ENST00000523026 687 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.1□□□□□ -2.23
USP9XQ93008 AL049838.1-201ENST00000563647 981 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.1□□□□□ -2.23
USP9XQ93008 MIR6715B-201ENST00000637172 77 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 DEFB108F-201ENST00000344638 222 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 VTRNA1-1-201ENST00000363120 99 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 SNORA79B-201ENST00000410557 148 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.1□□□□□ -2.23
USP9XQ93008 AC013470.3-201ENST00000420252 1194 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.1□□□□□ -2.23
USP9XQ93008 Y_RNA.644-201ENST00000459006 113 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 AC087190.1-201ENST00000484462 480 ntBASIC1.1□□□□□ -2.23
USP9XQ93008 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.1□□□□□ -2.23
USP9XQ93008 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.1□□□□□ -2.23
USP9XQ93008 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
USP9XQ93008 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.1□□□□□ -2.23
USP9XQ93008 RNU6-39P-201ENST00000384344 107 ntBASIC1.09□□□□□ -2.23
USP9XQ93008 MIR329-2-201ENST00000385029 84 ntBASIC1.09□□□□□ -2.23
USP9XQ93008 UBE2V1P13-201ENST00000436983 439 ntBASIC1.09□□□□□ -2.23
USP9XQ93008 AL161651.1-201ENST00000440882 223 ntBASIC1.09□□□□□ -2.23
USP9XQ93008 AC012181.1-201ENST00000479895 423 ntBASIC1.09□□□□□ -2.23
USP9XQ93008 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.09□□□□□ -2.23
USP9XQ93008 HSPE1P3-201ENST00000559254 309 ntBASIC1.09□□□□□ -2.23
USP9XQ93008 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
USP9XQ93008 PGBD4P6-201ENST00000421501 610 ntBASIC1.09□□□□□ -2.24
USP9XQ93008 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.24
USP9XQ93008 AC103833.1-201ENST00000517442 172 ntBASIC1.09□□□□□ -2.24
USP9XQ93008 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.09□□□□□ -2.24
USP9XQ93008 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.09□□□□□ -2.24
USP9XQ93008 AC121758.2-201ENST00000553271 193 ntBASIC1.09□□□□□ -2.24
USP9XQ93008 AC006270.3-201ENST00000605967 1036 ntBASIC1.09□□□□□ -2.24
USP9XQ93008 SNHG22-203ENST00000617833 660 ntBASIC1.09□□□□□ -2.24
USP9XQ93008 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.09□□□□□ -2.24
USP9XQ93008 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
USP9XQ93008 AC090515.1-201ENST00000465295 476 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 GLUD1P4-201ENST00000590914 418 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 AC138473.1-201ENST00000605717 526 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 AL445493.3-201ENST00000619568 477 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 AC048347.1-201ENST00000624621 427 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 AC111188.2-201ENST00000529697 1387 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USP9XQ93008 Y_RNA.170-201ENST00000363746 110 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 SNRPEP2-201ENST00000397592 279 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.08□□□□□ -2.24
USP9XQ93008 AC092902.1-201ENST00000486999 259 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.08□□□□□ -2.24
USP9XQ93008 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.08□□□□□ -2.24
USP9XQ93008 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
USP9XQ93008 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.08□□□□□ -2.24
USP9XQ93008 AC006338.1-201ENST00000618453 749 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.08□□□□□ -2.24
USP9XQ93008 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
USP9XQ93008 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.08□□□□□ -2.24
USP9XQ93008 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USP9XQ93008 RNU1-78P-201ENST00000391248 165 ntBASIC1.07□□□□□ -2.24
USP9XQ93008 Y_RNA.610-201ENST00000410681 103 ntBASIC1.07□□□□□ -2.24
USP9XQ93008 RNA5SP25-201ENST00000410815 110 ntBASIC1.07□□□□□ -2.24
USP9XQ93008 AC023424.2-201ENST00000493479 777 ntBASIC1.07□□□□□ -2.24
USP9XQ93008 AC093281.2-201ENST00000510153 597 ntBASIC1.07□□□□□ -2.24
USP9XQ93008 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.07□□□□□ -2.24
USP9XQ93008 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.07□□□□□ -2.24
USP9XQ93008 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms