Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSH3Q8TE77 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSH3Q8TE77 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.31□□□□□ -1.72
SSH3Q8TE77 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSH3Q8TE77 AC092326.2-201ENST00000624772 1561 ntBASIC4.31□□□□□ -1.72
SSH3Q8TE77 AL157700.1-201ENST00000561973 1432 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSH3Q8TE77 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSH3Q8TE77 NUP58P1-201ENST00000502546 1738 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC106871.1-201ENST00000568324 3102 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 FRG1BP-201ENST00000278882 761 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 RNU4-1-201ENST00000363925 141 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 RNU6-1322P-201ENST00000364309 107 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 MIR490-201ENST00000384865 128 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 MIR218-2-201ENST00000385006 110 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AL136116.1-201ENST00000403591 381 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 RNU6-908P-201ENST00000410160 94 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 SNRPEP10-201ENST00000420249 274 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC019097.1-201ENST00000424783 735 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 MTND1P14-201ENST00000427400 950 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 RPL7P54-201ENST00000438336 674 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 SDCBPP1-201ENST00000440192 890 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AL357552.1-201ENST00000445254 415 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AL136380.1-201ENST00000447970 162 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 RPS4XP2-201ENST00000458402 793 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC114786.4-201ENST00000508771 728 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 MTND3P22-201ENST00000510932 243 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC093677.1-201ENST00000514414 678 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 RNA5SP309-201ENST00000516670 106 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 IGKV2-26-201ENST00000518305 343 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 AC009318.4-201ENST00000620496 486 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSH3Q8TE77 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SSH3Q8TE77 AL359893.1-201ENST00000447628 1580 ntBASIC4.3□□□□□ -1.72
SSH3Q8TE77 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSH3Q8TE77 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSH3Q8TE77 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AL645937.1-201ENST00000641739 1652 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC008725.1-201ENST00000605123 2263 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSH3Q8TE77 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC097714.1-201ENST00000511272 1647 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 RNU6-28P-201ENST00000362378 107 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 RNU4-76P-201ENST00000364509 141 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 Y_RNA.279-201ENST00000364763 95 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AL356421.1-201ENST00000403255 413 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 RAC1P3-201ENST00000416129 580 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC244098.2-201ENST00000422068 99 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AP000907.1-201ENST00000428428 510 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AL138799.3-201ENST00000438968 350 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 FDX1P2-201ENST00000450769 375 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AP1S2P1-201ENST00000457344 379 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC022364.2-201ENST00000457963 554 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 PLGLA-201ENST00000465668 449 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 RN7SL293P-201ENST00000481765 281 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 RPL36AP51-201ENST00000487216 318 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 MTCO2P30-201ENST00000503662 364 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 PCBP2P3-201ENST00000509726 843 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 CENPUP1-201ENST00000526649 1202 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC053481.3-201ENST00000577881 843 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 MIR3118-1-201ENST00000581787 76 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC005261.5-201ENST00000596280 355 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC025588.3-201ENST00000604182 274 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC121334.2-201ENST00000605387 271 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 U3.45-201ENST00000607547 219 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AL391813.2-201ENST00000609113 322 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC091953.2-201ENST00000623979 160 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSH3Q8TE77 AC032011.1-201ENST00000611703 1549 ntBASIC4.29□□□□□ -1.72
SSH3Q8TE77 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSH3Q8TE77 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSH3Q8TE77 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSH3Q8TE77 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms