Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC89Q8N998 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC89Q8N998 AL356432.3-201ENST00000568952 465 ntBASIC3.38□□□□□ -1.87
CCDC89Q8N998 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC89Q8N998 AC011471.1-201ENST00000585766 187 ntBASIC3.38□□□□□ -1.87
CCDC89Q8N998 VN1R90P-201ENST00000595717 726 ntBASIC3.38□□□□□ -1.87
CCDC89Q8N998 AC008277.2-201ENST00000605196 797 ntBASIC3.38□□□□□ -1.87
CCDC89Q8N998 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC89Q8N998 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC89Q8N998 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC89Q8N998 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
CCDC89Q8N998 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC89Q8N998 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC89Q8N998 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC89Q8N998 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.38□□□□□ -1.87
CCDC89Q8N998 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC89Q8N998 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 RNU1-70P-201ENST00000362618 164 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 Y_RNA.46-201ENST00000362695 102 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC89Q8N998 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 U8.14-201ENST00000390843 143 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL122016.1-201ENST00000403365 367 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL445189.1-201ENST00000405722 338 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 RNA5SP229-201ENST00000410809 99 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 RPL7P10-201ENST00000417407 739 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 RPL37P21-201ENST00000435890 276 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC105252.1-201ENST00000503089 286 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 SNORA3.4-201ENST00000515969 96 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 RNU6-1003P-201ENST00000517099 105 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 MRPS36P5-201ENST00000551909 298 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC002400.1-201ENST00000569310 726 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC006130.2-201ENST00000586202 326 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC098826.3-201ENST00000603823 466 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL162713.1-201ENST00000604480 262 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL161798.1-201ENST00000604630 131 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC013562.2-201ENST00000611632 603 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 AL392088.2-201ENST00000637607 285 ntBASIC3.37□□□□□ -1.87
CCDC89Q8N998 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC89Q8N998 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC89Q8N998 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 RNA5SP119-201ENST00000362715 117 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 MIR554-201ENST00000384874 96 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AL512633.1-201ENST00000399931 655 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 RNU2-68P-201ENST00000410878 191 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 ZNF90P2-204ENST00000419323 1075 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 RPS27AP14-201ENST00000422868 454 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 OR2AS1P-201ENST00000427827 319 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AL512649.1-201ENST00000428997 581 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 HMGB1P9-201ENST00000429856 646 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 GPM6BP2-201ENST00000432046 144 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 AL513043.1-201ENST00000439124 535 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 GPM6BP1-201ENST00000446387 144 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 RNU1-45P-201ENST00000517191 141 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 TRMT10BP1-201ENST00000519377 943 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 OR5B10P-201ENST00000532869 642 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AC106785.1-201ENST00000565935 262 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 MIR4276-201ENST00000584832 70 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 AC022022.2-201ENST00000602989 360 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AC107294.1-201ENST00000609524 467 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AL157817.1-201ENST00000614264 790 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC89Q8N998 AC099506.2-201ENST00000623074 221 ntBASIC3.36□□□□□ -1.87
CCDC89Q8N998 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC89Q8N998 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms