Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 SNORA68.1-201ENST00000364537 132 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 MIR627-201ENST00000384979 97 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 RNU6-750P-201ENST00000390946 107 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AL031121.1-201ENST00000406553 254 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 Y_RNA.608-201ENST00000410647 95 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 SDCBPP3-201ENST00000419629 891 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 SEPT2P1-201ENST00000419651 180 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 RPL7P37-201ENST00000425095 738 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC137499.1-201ENST00000427602 88 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 ISCA1P2-201ENST00000438679 421 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 NEFMP1-201ENST00000443423 1006 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 CECR9-201ENST00000453421 199 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 SNORD105B-201ENST00000458770 79 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 RN7SL132P-201ENST00000478131 296 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 RPS27AP10-201ENST00000496103 208 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC022447.1-201ENST00000515358 464 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 RNA5SP471-201ENST00000516971 106 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 SNORD19.2-201ENST00000516978 73 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC008015.1-201ENST00000555505 465 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 MIR3616-201ENST00000584070 92 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC011471.1-201ENST00000585766 187 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC083760.1-201ENST00000589621 670 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AL358072.1-201ENST00000604156 575 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC104763.2-201ENST00000604179 382 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 MIR7851-201ENST00000610611 160 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC138749.5-201ENST00000611461 208 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC013562.2-201ENST00000611632 603 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC116165.2-201ENST00000616705 206 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AL354798.1-201ENST00000622505 329 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC007998.5-201ENST00000622938 237 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 FP236240.3-201ENST00000623061 327 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC092192.1-201ENST00000633154 1018 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC032011.1-201ENST00000611703 1549 ntBASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.36□□□□□ -2.03
LINC01561Q8N1V8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 HSPE1P11-201ENST00000339579 310 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 MIR148B-201ENST00000362252 99 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AL122016.1-201ENST00000403365 367 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNA5SP317-201ENST00000410176 116 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNU2-25P-201ENST00000411041 191 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNA5SP311-201ENST00000411290 116 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 Z99755.1-201ENST00000414048 380 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AC107081.1-201ENST00000414975 361 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AC011233.1-201ENST00000422812 283 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AL365203.2-201ENST00000423444 196 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 SKA2P1-201ENST00000425592 390 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RPL36AP53-201ENST00000432891 316 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 HMGB3P12-201ENST00000438745 556 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 OSTCP8-201ENST00000445117 448 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RPS26P21-201ENST00000475397 348 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AP000797.1-201ENST00000478870 387 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RPS3AP22-201ENST00000488297 769 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RPL39P36-201ENST00000490784 156 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 MRPS33P3-201ENST00000513456 322 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNA5SP315-201ENST00000516340 116 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 SNORA64.4-201ENST00000516632 81 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNU6-703P-201ENST00000516946 107 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNU6-1092P-201ENST00000516955 87 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNA5SP312-201ENST00000517068 116 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 RNU6-232P-201ENST00000517144 64 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AC025881.1-201ENST00000518851 512 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AC107934.1-201ENST00000522215 217 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 GLYCAM1-201ENST00000546596 285 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AL157394.1-201ENST00000562983 1224 ntBASIC2.35□□□□□ -2.03
LINC01561Q8N1V8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms