Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIX5Q8N196 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.39□□□□□ -1.55
SIX5Q8N196 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SIX5Q8N196 AL731566.1-201ENST00000620490 1937 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SIX5Q8N196 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.38□□□□□ -1.55
SIX5Q8N196 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 AL139811.1-201ENST00000424779 2299 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 AL591034.2-201ENST00000402839 359 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 AL080315.1-201ENST00000406055 466 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 MTCO3P19-201ENST00000415864 321 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 AC007098.1-201ENST00000420122 367 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 TOMM20P4-201ENST00000427861 435 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 AC092423.1-201ENST00000430165 186 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 SUMO1P2-201ENST00000452524 304 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX5Q8N196 CEACAMP4-201ENST00000457676 421 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 HMGN2P13-201ENST00000476476 274 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX5Q8N196 RPS17P5-201ENST00000498293 408 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX5Q8N196 RNU1-86P-201ENST00000516108 154 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 RNU1-107P-201ENST00000516617 154 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 RNU4-60P-201ENST00000517239 135 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.38□□□□□ -1.55
SIX5Q8N196 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX5Q8N196 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.38□□□□□ -1.55
SIX5Q8N196 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX5Q8N196 CPDP1-201ENST00000579660 283 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.38□□□□□ -1.55
SIX5Q8N196 AC123912.5-201ENST00000605470 343 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 MIR1244-1-201ENST00000612829 85 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 MIR1244-3-201ENST00000635744 85 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 MIR1244-2-201ENST00000636449 85 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 MIR1244-4-202ENST00000636813 85 ntBASIC5.38□□□□□ -1.55
SIX5Q8N196 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SIX5Q8N196 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SIX5Q8N196 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX5Q8N196 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.38□□□□□ -1.55
SIX5Q8N196 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SIX5Q8N196 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX5Q8N196 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX5Q8N196 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIX5Q8N196 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
SIX5Q8N196 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.37□□□□□ -1.55
SIX5Q8N196 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX5Q8N196 AC079741.1-201ENST00000321498 212 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 RNU6-1167P-201ENST00000363227 94 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 Y_RNA.515-201ENST00000384535 112 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 RNU6-700P-201ENST00000391043 107 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 SAR1AP2-201ENST00000392696 594 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX5Q8N196 AC004938.1-201ENST00000438468 308 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX5Q8N196 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX5Q8N196 U8.21-201ENST00000459536 136 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 AC022493.1-201ENST00000492984 337 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SIX5Q8N196 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.37□□□□□ -1.55
SIX5Q8N196 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.37□□□□□ -1.55
SIX5Q8N196 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.37□□□□□ -1.55
SIX5Q8N196 TRAV37-201ENST00000553906 342 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 PARP1P2-201ENST00000556806 195 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX5Q8N196 AP000769.2-201ENST00000602344 396 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 AL390123.1-201ENST00000603216 237 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 AC098826.3-201ENST00000603823 466 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 AC006023.2-201ENST00000609916 167 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SIX5Q8N196 MIR6780A-201ENST00000615089 68 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 AL591926.8-201ENST00000616876 211 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX5Q8N196 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX5Q8N196 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SIX5Q8N196 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIX5Q8N196 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX5Q8N196 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SIX5Q8N196 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX5Q8N196 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SIX5Q8N196 AC114774.1-201ENST00000507410 1770 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 OR4G2P-202ENST00000641004 1759 ntBASIC5.37□□□□□ -1.55
SIX5Q8N196 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX5Q8N196 AL049555.1-201ENST00000562834 1933 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 SDAD1P1-202ENST00000524156 2051 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
SIX5Q8N196 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SIX5Q8N196 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX5Q8N196 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX5Q8N196 RPL9P7-201ENST00000330965 580 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 U3.3-201ENST00000362986 216 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms