Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00346Q8IVM7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00346Q8IVM7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC00346Q8IVM7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
LINC00346Q8IVM7 PWAR6-201ENST00000552334 4618 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 FTLP6-201ENST00000355274 422 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 RNU5E-1-201ENST00000362477 120 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 SNORD56.2-201ENST00000363242 71 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 RNU6-701P-201ENST00000384059 107 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 RPS3AP36-201ENST00000398190 775 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 RN7SKP142-201ENST00000411236 328 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 RAB28P1-201ENST00000411517 641 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 ELOCP4-201ENST00000420090 333 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 ISCA1P1-201ENST00000426679 387 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 OR2AS1P-201ENST00000427827 319 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 SNRPEP9-201ENST00000436794 238 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 MTND1P3-201ENST00000484956 952 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 RNU6-579P-201ENST00000516879 102 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 SUB1P1-201ENST00000524415 382 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AL358072.1-201ENST00000604156 575 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AC087752.4-201ENST00000605911 462 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 OR2AS2P-201ENST00000606902 342 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AP002360.4-201ENST00000606980 481 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AP003399.1-201ENST00000637534 361 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 AC099654.7-201ENST00000635788 2127 ntBASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LINC00346Q8IVM7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LINC00346Q8IVM7 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.9
LINC00346Q8IVM7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.15□□□□□ -1.9
LINC00346Q8IVM7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LINC00346Q8IVM7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 RNU1-105P-201ENST00000363470 161 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 RN7SKP227-201ENST00000364445 330 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 U8.11-201ENST00000384699 133 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 U8.12-201ENST00000384701 133 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 RN7SKP263-201ENST00000411194 309 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 BTF3L4P3-201ENST00000418879 476 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 HMGB1P9-201ENST00000429856 646 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC091390.1-201ENST00000433904 331 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 ARPC3P1-201ENST00000437218 533 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 MTATP6P26-201ENST00000445926 662 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 FABP5P15-201ENST00000453566 214 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 U8.18-201ENST00000459285 133 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC006483.1-201ENST00000487308 313 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 FCF1P3-201ENST00000496394 590 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 MTND4LP22-201ENST00000508209 276 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 APOOP4-201ENST00000513530 597 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 Vault.3-201ENST00000516676 95 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 RNU6-677P-201ENST00000516914 101 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 RNU2-46P-201ENST00000517038 113 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 RANP9-201ENST00000519957 271 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 RPL21P12-201ENST00000559810 515 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC068135.2-201ENST00000569293 1028 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 MTCO3P24-201ENST00000572729 782 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC015871.2-201ENST00000603605 948 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC007619.2-201ENST00000605743 379 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC068831.8-201ENST00000620171 435 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC068880.5-201ENST00000624331 290 ntBASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC00346Q8IVM7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC00346Q8IVM7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC00346Q8IVM7 CR848007.1-201ENST00000442354 1699 ntBASIC3.14□□□□□ -1.91
LINC00346Q8IVM7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC00346Q8IVM7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC00346Q8IVM7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC00346Q8IVM7 AC007823.1-201ENST00000569932 1566 ntBASIC3.14□□□□□ -1.91
LINC00346Q8IVM7 UBE2L2-201ENST00000254302 429 ntBASIC3.14□□□□□ -1.91
LINC00346Q8IVM7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms