Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC026427.2-201ENST00000506228 536 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 RPL37P25-201ENST00000507308 276 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 RNA5SP282-201ENST00000516355 108 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC025881.1-201ENST00000518851 512 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC022080.3-201ENST00000544433 482 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 HMGB1P14-201ENST00000557424 591 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC099786.3-201ENST00000565735 1410 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 CYCSP39-201ENST00000565821 309 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC005951.2-201ENST00000576282 495 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC103810.1-201ENST00000579873 453 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 DDX43P2-201ENST00000604753 1354 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL391834.2-201ENST00000609982 546 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL161629.2-201ENST00000615347 275 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL109620.1-201ENST00000618738 1197 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC006386.1-201ENST00000619436 415 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL159972.1-201ENST00000625150 448 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC008669.1-201ENST00000565823 2178 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 RNA5SP387-201ENST00000364226 106 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 Y_RNA.333-201ENST00000365274 102 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 U8.8-201ENST00000365399 135 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 RNU6-744P-201ENST00000365557 107 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 RNU6-1316P-201ENST00000384242 108 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 RNU6-114P-201ENST00000384704 105 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 RPLP0P7-201ENST00000416050 667 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 SPA17P1-201ENST00000416656 452 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC092648.1-201ENST00000425870 423 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AL365496.1-201ENST00000426885 215 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC087499.2-201ENST00000432861 149 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC009296.1-201ENST00000443146 155 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC104563.1-201ENST00000476147 376 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 LARP1BP2-201ENST00000486594 519 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC024589.1-201ENST00000512207 263 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC068135.2-201ENST00000569293 1028 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC022306.3-201ENST00000619930 550 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 AC135776.4-201ENST00000624300 1904 ntBASIC2.54□□□□□ -2
NUDCD3Q8IVD9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
NUDCD3Q8IVD9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AL049641.1-201ENST00000441055 1948 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC007785.2-201ENST00000598627 1916 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 RNU1-140P-201ENST00000365040 165 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 RNU1-39P-201ENST00000383897 165 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 UBA52P6-201ENST00000399822 382 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AL356057.3-201ENST00000402607 340 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 TPMTP3-201ENST00000411928 735 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 Z85995.1-201ENST00000415547 335 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC006946.1-201ENST00000429106 328 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 SNRPEP7-201ENST00000438350 220 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AL109741.2-201ENST00000455561 343 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 HIGD1AP13-201ENST00000509878 289 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC010587.2-201ENST00000511727 448 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 OR5BM1P-201ENST00000512021 366 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC090888.1-201ENST00000561335 1141 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 HMGB1P6-201ENST00000569046 646 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 MIR4325-201ENST00000583049 90 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AL035413.2-201ENST00000604801 525 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC090186.1-201ENST00000605991 572 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms