Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 IMMP1LP2-201ENST00000552954 492 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 MIR4504-201ENST00000577413 92 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 MIR3149-201ENST00000584629 83 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 MIR5684-201ENST00000585074 65 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 AL670379.11-201ENST00000604059 253 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AL670379.10-201ENST00000604330 253 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AL670379.12-201ENST00000605291 253 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AL670379.9-201ENST00000605428 253 ntBASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VRK3Q8IV63 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VRK3Q8IV63 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.01□□□□□ -1.77
VRK3Q8IV63 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 MTND5P10-201ENST00000603719 1809 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 AC009951.1-201ENST00000623674 2614 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4□□□□□ -1.77
VRK3Q8IV63 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4□□□□□ -1.77
VRK3Q8IV63 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 RNA5SP502-201ENST00000362694 119 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 RNU6-1188P-201ENST00000363795 107 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 RNA5SP513-201ENST00000364648 118 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 Y_RNA.378-201ENST00000365652 113 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
VRK3Q8IV63 RNU6-1029P-201ENST00000384109 107 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 MT-TG-201ENST00000387429 68 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4□□□□□ -1.77
VRK3Q8IV63 RPL37P10-201ENST00000412884 288 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4□□□□□ -1.77
VRK3Q8IV63 OR6C66P-201ENST00000414917 930 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4□□□□□ -1.77
VRK3Q8IV63 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4□□□□□ -1.77
VRK3Q8IV63 AF228730.2-201ENST00000438784 848 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4□□□□□ -1.77
VRK3Q8IV63 TPT1P12-201ENST00000448968 492 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 RPL10P17-201ENST00000453852 316 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 PPIAP21-201ENST00000464473 501 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 RN7SL860P-201ENST00000473738 223 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4□□□□□ -1.77
VRK3Q8IV63 CCDC34P1-201ENST00000507441 517 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 MTCYBP40-201ENST00000509390 1135 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 RNU2-10P-201ENST00000516375 211 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 RNA5SP454-201ENST00000517231 127 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 AP003122.3-201ENST00000526316 255 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4□□□□□ -1.77
VRK3Q8IV63 AC109635.4-202ENST00000531666 412 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4□□□□□ -1.77
VRK3Q8IV63 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4□□□□□ -1.77
VRK3Q8IV63 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4□□□□□ -1.77
VRK3Q8IV63 COX6CP3-201ENST00000580869 223 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4□□□□□ -1.77
VRK3Q8IV63 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4□□□□□ -1.77
VRK3Q8IV63 PSMA6P4-201ENST00000603247 718 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 AL591034.3-201ENST00000605511 685 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 MIR6867-201ENST00000610636 67 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4□□□□□ -1.77
VRK3Q8IV63 AC098657.3-201ENST00000620434 263 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4□□□□□ -1.77
VRK3Q8IV63 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
VRK3Q8IV63 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
VRK3Q8IV63 AL450326.2-201ENST00000421913 1962 ntBASIC4□□□□□ -1.77
VRK3Q8IV63 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VRK3Q8IV63 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC009313.2-201ENST00000417893 1941 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VRK3Q8IV63 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VRK3Q8IV63 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VRK3Q8IV63 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 SNORD35B-201ENST00000363660 87 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 RNU6-1318P-201ENST00000365389 103 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 MIR92A2-201ENST00000385299 75 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 AL139397.2-201ENST00000404529 772 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 RNU6-985P-201ENST00000410182 104 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 HSPE1P12-201ENST00000412576 301 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC009310.1-201ENST00000414414 451 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AL356095.1-201ENST00000417217 199 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC114482.1-201ENST00000418010 247 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 NUP35P1-201ENST00000422734 947 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 SKA2P1-201ENST00000425592 390 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC020550.1-201ENST00000447385 163 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms