Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 Y_RNA.112-201ENST00000363250 102 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 SNORD116-11-201ENST00000383882 92 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RNU6-741P-201ENST00000383889 107 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RNU1-82P-201ENST00000390851 165 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RNU6-985P-201ENST00000410182 104 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RPL21P90-201ENST00000415692 466 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AC140479.3-201ENST00000418944 1126 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AL592045.1-201ENST00000429867 352 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RPL30P15-201ENST00000457129 321 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RPS27P27-201ENST00000498779 255 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AC093840.1-201ENST00000511599 336 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RN7SKP24-201ENST00000515888 284 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RNU6-1315P-201ENST00000517187 99 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RN7SKP295-201ENST00000517264 153 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 MIR3672-201ENST00000584290 82 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 MIR5692C1-201ENST00000585309 91 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AC012119.1-201ENST00000603184 222 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AC133104.2-201ENST00000615272 193 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 U4.1-201ENST00000620349 87 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 AC008568.2-201ENST00000623862 2313 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 PNPT1P2-201ENST00000456768 2050 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NPAS4Q8IUM7 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 ZNF285B-201ENST00000561698 1767 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RNU6-562P-201ENST00000362731 107 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RNU6-395P-201ENST00000365662 106 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RNU6-214P-201ENST00000384130 107 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RNA5SP239-201ENST00000410218 129 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RN7SKP177-201ENST00000410567 355 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 CYP4F29P-201ENST00000420685 446 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 MTCYBP10-201ENST00000424905 650 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AL583843.1-201ENST00000456070 346 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AP000873.1-201ENST00000463987 400 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RPL7P43-201ENST00000478876 753 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AP000926.1-201ENST00000479573 241 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RN7SL283P-201ENST00000489055 303 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC008526.1-201ENST00000509149 338 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 MTCYBP40-201ENST00000509390 1135 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 RNU6-709P-201ENST00000517257 104 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC026470.2-201ENST00000561492 181 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC084783.1-201ENST00000565846 910 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 NUTF2P8-201ENST00000604593 363 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC006023.2-201ENST00000609916 167 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 AC112198.2-201ENST00000426589 6996 ntBASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NPAS4Q8IUM7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms