Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC087783.2-201ENST00000605070 562 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL670379.5-201ENST00000605253 252 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL670379.8-201ENST00000605353 252 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL670379.7-201ENST00000605823 252 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL391684.1-202ENST00000641293 1636 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AL031595.2-201ENST00000624215 19071 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AL672167.1-204ENST00000641875 3017 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 RNU6-858P-201ENST00000362436 107 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 RNA5SP391-201ENST00000363456 119 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 RNA5SP428-201ENST00000365129 132 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 MRPL35P1-201ENST00000404272 572 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 EZH2P1-201ENST00000431167 291 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AL133244.1-201ENST00000456007 258 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC022034.3-201ENST00000471393 478 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AF186190.1-201ENST00000517470 480 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC022559.1-201ENST00000520905 205 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC073657.2-201ENST00000605661 303 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC100827.5-201ENST00000615883 426 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 THAP12P5-201ENST00000405864 2275 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 BTBD10P1-201ENST00000549824 1352 ntBASIC4.49□□□□□ -1.69
ATG4DQ86TL0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4DQ86TL0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AC009643.2-201ENST00000603543 1448 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 ZNF285B-201ENST00000561698 1767 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 RNU1-76P-201ENST00000362903 159 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 RNU6-81P-201ENST00000365608 104 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 RNU6-45P-201ENST00000384471 107 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AF186996.5-201ENST00000418098 904 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 GAPDHP27-201ENST00000447427 1020 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 NDUFB4P10-201ENST00000452541 359 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 RPL7P23-201ENST00000493874 747 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 RN7SL591P-201ENST00000496150 292 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 HMGB3P16-201ENST00000508037 287 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 BNIP3P1-201ENST00000547295 580 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AL158827.2-201ENST00000602494 330 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AL160281.1-201ENST00000605307 311 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 RNU6-85P-201ENST00000605989 107 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 FAM25E-202ENST00000608562 189 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AC087385.3-201ENST00000620477 187 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AL365265.1-201ENST00000621045 234 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AL691447.3-201ENST00000635020 330 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AC000374.1-201ENST00000434698 1745 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AP000560.1-201ENST00000624150 1937 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms