Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RPS12P24-201ENST00000412619 387 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 HMGB1P49-201ENST00000418882 569 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AC023424.2-201ENST00000493479 777 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AC105313.1-201ENST00000509121 353 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 NPM1P52-201ENST00000518264 846 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AP003033.1-201ENST00000527244 415 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 HSPE1P14-201ENST00000605812 302 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AP000560.1-201ENST00000624150 1937 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 DUXAP5-201ENST00000529668 529 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 SNORD39.2-201ENST00000579995 76 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC013553.2-201ENST00000604244 589 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC123912.5-201ENST00000605470 343 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AL449363.1-201ENST00000617815 186 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC010487.4-201ENST00000637027 61 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 RNA5SP139-201ENST00000364340 117 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 UBE2FP3-201ENST00000436366 524 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 KLRA1P-201ENST00000503499 986 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC021146.8-201ENST00000507455 733 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC093281.2-201ENST00000510153 597 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 RNU1-92P-201ENST00000517017 135 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 HSPE1P20-201ENST00000538133 289 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC125611.2-201ENST00000551907 647 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 SNRPGP15-201ENST00000600149 222 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AC006329.2-201ENST00000611491 394 ntBASIC0.76□□□□□ -2.29
VPS13BQ7Z7G8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 BMI1P1-201ENST00000445879 941 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AC007115.1-201ENST00000546853 234 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AC010200.2-201ENST00000605098 235 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 RNU1-133P-201ENST00000364867 167 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AC073464.3-201ENST00000422564 712 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 SDCBPP1-201ENST00000440192 890 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 MRPS17P9-201ENST00000511924 393 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 OSBPL9P3-201ENST00000534523 595 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AL163153.1-201ENST00000554223 283 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AL356118.1-201ENST00000635272 1078 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 RPL31P2-201ENST00000413849 377 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AIMP1P2-201ENST00000425294 312 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AC021087.2-201ENST00000504656 1203 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 Y_RNA.681-201ENST00000516445 113 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AC073413.2-201ENST00000604332 360 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AL020996.3-201ENST00000606617 222 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AC091932.3-201ENST00000624223 323 ntBASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
VPS13BQ7Z7G8 AL583843.1-201ENST00000456070 346 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 SNRPFP3-201ENST00000457792 225 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 CBX3P2-202ENST00000583365 535 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 SEPT7P9-203ENST00000604116 343 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 RNU6-50P-201ENST00000362356 103 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 SNORA67.1-201ENST00000364749 141 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 RNU1-52P-201ENST00000384190 164 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 PSMA2P3-201ENST00000429685 675 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 IPO7P1-201ENST00000442031 636 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 AC023790.1-201ENST00000482174 347 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 RNU6-964P-201ENST00000516524 69 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 SNORD84-203ENST00000584275 78 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 CENPCP1-201ENST00000533085 2578 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 SNORA51.2-201ENST00000364595 132 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 SNORA18.2-201ENST00000383865 132 ntBASIC0.74□□□□□ -2.29
VPS13BQ7Z7G8 RNU1-78P-201ENST00000391248 165 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms