Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 RNU6-911P-201ENST00000516523 104 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AC144568.1-201ENST00000520139 137 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 SNRPGP16-201ENST00000533275 226 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AC087783.2-201ENST00000605070 562 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AC103858.2-201ENST00000621471 543 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AC138627.2-201ENST00000624202 601 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
UBE3DQ7Z6J8 AC010615.1-201ENST00000594254 1764 ntBASIC4.65□□□□□ -1.66
UBE3DQ7Z6J8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.65□□□□□ -1.66
UBE3DQ7Z6J8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
UBE3DQ7Z6J8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
UBE3DQ7Z6J8 AC090971.4-201ENST00000560291 1800 ntBASIC4.65□□□□□ -1.66
UBE3DQ7Z6J8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
UBE3DQ7Z6J8 INTS6P1-201ENST00000504674 2530 ntBASIC4.65□□□□□ -1.66
UBE3DQ7Z6J8 RNU6-263P-201ENST00000363811 107 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 RNU6-790P-201ENST00000384479 105 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 RNU6-882P-201ENST00000391025 103 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 GLULP6-201ENST00000399502 913 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 MTCO3P19-201ENST00000415864 321 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC139712.2-201ENST00000424302 339 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 RPS20P1-201ENST00000434853 354 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 RPS11P1-201ENST00000451072 473 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 snoU13.20-201ENST00000459180 104 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 RPS15AP34-201ENST00000487776 387 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 SNORA25.11-201ENST00000515935 105 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC104576.1-201ENST00000524225 88 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC007375.1-201ENST00000554513 578 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC026470.2-201ENST00000561492 181 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 RPL23AP87-202ENST00000573039 466 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 MIR4273-201ENST00000582824 84 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 MTND4LP5-201ENST00000605152 292 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 HMGB1P50-201ENST00000605814 607 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AL355810.1-201ENST00000614629 552 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC034102.8-201ENST00000615146 484 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 MIR7155-201ENST00000615925 56 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 RMST_4.1-201ENST00000616886 107 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC019206.1-201ENST00000621938 425 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC091905.4-201ENST00000623432 202 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AL672167.1-204ENST00000641875 3017 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 SDAD1P2-201ENST00000441308 2028 ntBASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UBE3DQ7Z6J8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AL731566.1-201ENST00000620490 1937 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AC099654.2-201ENST00000433031 1980 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 SAMMSON-213ENST00000641336 1521 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 RNY1P16-201ENST00000363063 111 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 RNU6-933P-201ENST00000384424 107 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AL645927.1-201ENST00000396783 406 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 HSPE1P8-201ENST00000406997 288 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 SSXP9-201ENST00000417503 292 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 OR2AM1P-201ENST00000422137 422 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AL645608.4-201ENST00000423619 154 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 CEACAMP7-201ENST00000444105 496 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 RNU6-927P-201ENST00000516199 100 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 SNORA31.22-201ENST00000517204 135 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AL049839.1-201ENST00000556151 657 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 HMGB3P26-201ENST00000560051 582 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AC068790.4-201ENST00000602474 263 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AP000787.2-201ENST00000604432 568 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AC015914.2-201ENST00000618167 288 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 AC068870.2-201ENST00000620635 389 ntBASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
UBE3DQ7Z6J8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms