Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RN7SL432P-201ENST00000484057 298 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AC231760.1-201ENST00000498002 260 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 RPL38P4-201ENST00000502376 214 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 RNA5SP49-201ENST00000516450 115 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 MIR2114-201ENST00000516645 80 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 MIR4715-201ENST00000584117 79 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 C8orf59P2-201ENST00000603441 271 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 XIST_intron.1-201ENST00000619444 68 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AL589994.2-201ENST00000621124 579 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AC011155.2-201ENST00000623202 216 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 U6.114-201ENST00000636407 96 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AP001350.1-201ENST00000601906 1524 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 AC007256.1-201ENST00000392253 2765 ntBASIC3.74□□□□□ -1.81
PTCHD4Q6ZW05 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 IPO8P1-201ENST00000455509 3109 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-552P-201ENST00000362869 119 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RNA5SP235-201ENST00000365411 114 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-61P-201ENST00000365528 109 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-903P-201ENST00000391270 109 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 UBE2V1P2-201ENST00000397758 440 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 TXNP7-201ENST00000406296 293 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RPL21P66-201ENST00000426566 466 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RPL36AP6-201ENST00000435770 321 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL118520.1-201ENST00000450770 291 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 MTND3P16-201ENST00000452205 344 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RPL23AP24-201ENST00000458203 385 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 VN1R105P-201ENST00000486595 910 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC026726.1-201ENST00000512859 601 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 RNU4-29P-201ENST00000515943 174 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AP004371.1-201ENST00000525240 214 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC093012.1-202ENST00000549403 582 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 SYF2P1-201ENST00000550658 413 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 MIR4703-201ENST00000577728 79 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC234771.5-201ENST00000600161 514 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL117336.2-201ENST00000602435 335 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL670379.6-201ENST00000603753 252 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL670379.11-201ENST00000604059 253 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC008162.1-201ENST00000604718 254 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL670379.1-201ENST00000604752 252 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL670379.5-201ENST00000605253 252 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL670379.12-201ENST00000605291 253 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL670379.8-201ENST00000605353 252 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL670379.7-201ENST00000605823 252 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 FAM27D1-201ENST00000612308 341 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC015967.1-201ENST00000619893 476 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC079684.1-201ENST00000621405 437 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 AC116667.1-201ENST00000604855 2072 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 TAB3P1-202ENST00000452645 1634 ntBASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD4Q6ZW05 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 NCAPGP1-201ENST00000505112 1814 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 Y_RNA.61-201ENST00000362835 102 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 RNA5SP447-201ENST00000363749 119 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 SMIM11P1-201ENST00000369586 178 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-701P-201ENST00000384059 107 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-767P-201ENST00000384132 107 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-1181P-201ENST00000384191 106 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 AL138878.1-201ENST00000405131 347 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 AL162578.1-201ENST00000406202 378 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-193P-201ENST00000410977 107 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 SRIP2-201ENST00000428470 166 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 RPS29P17-201ENST00000430795 166 ntBASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PTCHD4Q6ZW05 SNORA71B-202ENST00000439232 272 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms