Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL049734.2-201ENST00000441066 616 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AC008716.1-201ENST00000511084 513 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 RNU6-528P-201ENST00000516926 100 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 ATP5F1P5-201ENST00000526403 760 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 DEFB130C-202ENST00000530001 230 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 MIR4635-201ENST00000583759 79 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 AP005901.5-201ENST00000545779 1796 ntBASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.4□□□□□ -2.03
H3F3CQ6NXT2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 RNU1-100P-201ENST00000365255 165 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 Y_RNA.408-201ENST00000383987 102 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 SNORA36C-201ENST00000384289 132 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 DHFRP6-201ENST00000401776 268 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AL450338.1-201ENST00000407987 512 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 MTCO2P5-201ENST00000422621 426 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 PPP1R11P2-201ENST00000423543 382 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC011816.1-201ENST00000441346 546 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC128713.1-201ENST00000471495 306 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AP000852.1-201ENST00000472460 573 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 SUMO2P6-201ENST00000505273 288 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 SNORA31.18-201ENST00000517043 134 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 SUB1P1-201ENST00000524415 382 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 UBTFL10-201ENST00000528532 562 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AL133271.1-201ENST00000538229 291 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 RPL23AP84-201ENST00000571193 464 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC090079.2-201ENST00000575289 768 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 MIR4298-201ENST00000584380 73 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 DUXAP3-201ENST00000603616 594 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AL158211.4-201ENST00000606988 584 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC093673.2-201ENST00000609674 331 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC093838.1-201ENST00000613014 469 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 AC120349.2-201ENST00000625002 298 ntBASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.39□□□□□ -2.03
H3F3CQ6NXT2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 CCT4P2-201ENST00000233836 1548 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 SNORD62.1-201ENST00000362541 86 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 SNORA68.1-201ENST00000364537 132 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 RNU6-301P-201ENST00000384277 107 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AL355143.1-201ENST00000407101 841 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 USP9YP20-201ENST00000419224 558 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AL139413.1-201ENST00000421309 217 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AL139421.1-201ENST00000423010 169 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 SUMO1P4-201ENST00000429430 302 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 LARP1BP2-201ENST00000486594 519 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 EIF4EP3-201ENST00000498782 656 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC138853.1-201ENST00000503549 823 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC114981.1-201ENST00000503897 678 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC010486.1-201ENST00000511793 424 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 RNU6-276P-201ENST00000516114 96 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 RNU6-840P-201ENST00000517275 65 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC087808.1-201ENST00000520501 361 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 LRRC6P1-201ENST00000532188 885 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC087465.1-201ENST00000560574 245 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC025281.1-201ENST00000567026 265 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC009163.5-201ENST00000575421 637 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC060766.3-201ENST00000591442 263 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 BNIP3P31-201ENST00000604515 566 ntBASIC2.38□□□□□ -2.03
H3F3CQ6NXT2 AC112220.2-201ENST00000605513 533 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms