Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 RNU6-923P-201ENST00000364753 107 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 RNU6-384P-201ENST00000364900 104 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 Y_RNA.488-201ENST00000384403 102 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 SNORD20-201ENST00000384550 80 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 RNA5SP251-201ENST00000410614 137 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 SSXP9-201ENST00000417503 292 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 TOMM20P4-201ENST00000427861 435 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 AC016700.2-201ENST00000446011 156 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 RPL10P17-201ENST00000453852 316 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 AC012123.2-201ENST00000485809 248 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 AC140059.1-201ENST00000489238 361 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 AC104164.2-201ENST00000496953 495 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 SNORA27.4-201ENST00000516650 95 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 AL162431.4-201ENST00000604674 411 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 AL365222.1-201ENST00000614661 98 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 RNA5SP479-201ENST00000364858 117 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 RNU4-9P-201ENST00000364951 139 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 Y_RNA.400-201ENST00000383963 111 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 RNU6-21P-201ENST00000384710 107 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 RN7SKP114-201ENST00000410327 279 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 DDX39BP1-205ENST00000422507 192 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 AC008267.6-201ENST00000441664 139 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 KNOP1P3-201ENST00000446933 426 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 SNORD2.1-201ENST00000458762 69 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 snoU13.30-201ENST00000458951 104 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 PPP1R11P1-201ENST00000486095 376 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 AL160314.1-201ENST00000490836 438 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 AC006427.1-201ENST00000514359 712 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 RN7SKP260-201ENST00000516907 149 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 AC006484.1-201ENST00000435086 1884 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 TTC41P-205ENST00000551270 3963 ntBASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCRAQ6ISU1 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 Y_RNA.286-201ENST00000364813 102 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 LAP3P1-201ENST00000403648 294 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AL513331.1-201ENST00000411908 397 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AL390729.2-201ENST00000416137 156 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AL158156.1-201ENST00000422509 473 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 TMEM183AP1-205ENST00000432739 290 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 Z82188.1-201ENST00000436709 154 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 snoU13.1-201ENST00000459157 104 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AC140172.1-201ENST00000502928 141 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AC023575.1-201ENST00000580510 358 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AC005046.1-201ENST00000608515 625 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AC083843.3-201ENST00000623679 2186 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 AL731532.2-201ENST00000623542 1953 ntBASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCRAQ6ISU1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms