Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.46□□□□□ -1.7
KRT40Q6A162 AP001029.3-201ENST00000588063 596 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC126177.8-201ENST00000618339 1015 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC009248.2-201ENST00000619826 254 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC103858.2-201ENST00000621471 543 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 C2orf27A-204ENST00000623058 969 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
KRT40Q6A162 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.46□□□□□ -1.7
KRT40Q6A162 AC009229.4-201ENST00000623854 1947 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
KRT40Q6A162 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRT40Q6A162 OR4G1P-203ENST00000641984 1631 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
KRT40Q6A162 NACAP2-201ENST00000318548 624 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 RNU4-20P-201ENST00000365601 151 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 RNU6-213P-201ENST00000384051 104 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 NDUFB4P4-201ENST00000404822 243 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 Z92545.1-201ENST00000411782 234 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.45□□□□□ -1.7
KRT40Q6A162 FGF7P3-201ENST00000454645 303 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AC133473.1-201ENST00000455173 299 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 HMGN2P26-201ENST00000463169 339 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AL163973.1-201ENST00000484753 577 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AL139099.1-201ENST00000497398 403 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 BTF3L4P4-201ENST00000506381 449 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 RNU1-95P-201ENST00000516357 160 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 RNU1-128P-201ENST00000516704 160 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 RNU7-30P-201ENST00000516835 62 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT40Q6A162 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.45□□□□□ -1.7
KRT40Q6A162 OR5BN1P-201ENST00000532955 829 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT40Q6A162 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.45□□□□□ -1.7
KRT40Q6A162 AC107016.1-201ENST00000550463 337 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 SCOCP1-201ENST00000554676 349 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AL360157.1-201ENST00000565962 87 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT40Q6A162 AC105429.2-201ENST00000610567 517 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 AL590099.1-201ENST00000615276 138 ntBASIC4.45□□□□□ -1.7
KRT40Q6A162 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRT40Q6A162 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRT40Q6A162 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRT40Q6A162 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRT40Q6A162 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
KRT40Q6A162 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AL359893.1-201ENST00000447628 1580 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT40Q6A162 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRT40Q6A162 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
KRT40Q6A162 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRT40Q6A162 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRT40Q6A162 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT40Q6A162 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT40Q6A162 Y_RNA.184-201ENST00000363884 108 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 SNORA5A-201ENST00000384111 134 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 Y_RNA.460-201ENST00000384255 102 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 PTMAP5-201ENST00000393073 333 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 RN7SKP156-201ENST00000410308 342 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT40Q6A162 AC018630.2-202ENST00000422992 927 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRT40Q6A162 AC137499.1-201ENST00000427602 88 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT40Q6A162 OR4K11P-201ENST00000431829 904 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 HMGN2P31-201ENST00000432430 273 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT40Q6A162 UBE2V1P13-201ENST00000436983 439 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AF228730.2-201ENST00000438784 848 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AC093156.1-201ENST00000440382 670 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 DDX3P2-201ENST00000446138 111 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 RPL7P12-201ENST00000446719 750 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AC233279.1-201ENST00000455300 423 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 GMFBP1-201ENST00000467831 427 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AC006512.1-201ENST00000468816 291 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AC084198.1-201ENST00000477747 402 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AC103851.1-201ENST00000506833 274 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AC017037.2-201ENST00000513850 890 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 RNU6-27P-201ENST00000516146 107 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 RNU6-352P-201ENST00000516908 107 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.44□□□□□ -1.7
KRT40Q6A162 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT40Q6A162 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT40Q6A162 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT40Q6A162 AC068446.3-201ENST00000555285 382 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT40Q6A162 AC106782.4-201ENST00000568264 210 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AL355375.2-201ENST00000574825 175 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 OR4K8P-201ENST00000578842 1048 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AC022432.1-201ENST00000595739 310 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 FP236240.3-201ENST00000623061 327 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 AC090574.1-201ENST00000623186 233 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT40Q6A162 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT40Q6A162 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT40Q6A162 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
KRT40Q6A162 ASNSP3-201ENST00000451989 1306 ntBASIC4.44□□□□□ -1.7
KRT40Q6A162 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT40Q6A162 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRT40Q6A162 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms