Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RC3H1Q5TC82 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.09□□□□□ -1.44
RC3H1Q5TC82 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
RC3H1Q5TC82 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
RC3H1Q5TC82 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
RC3H1Q5TC82 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RC3H1Q5TC82 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RC3H1Q5TC82 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RC3H1Q5TC82 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 RNU6-1284P-201ENST00000363701 100 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 SMIM11P1-201ENST00000369586 178 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 RNU6-1226P-201ENST00000384317 107 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 EZH2P1-201ENST00000431167 291 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 PPIAP3-201ENST00000450588 505 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 RNU7-138P-201ENST00000459479 64 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 RPL7P23-201ENST00000493874 747 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 AC104057.1-201ENST00000515547 497 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 AP001781.1-201ENST00000530977 207 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 SNORA74C-1-201ENST00000580726 201 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 MIR3939-201ENST00000582614 106 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 MIR3138-201ENST00000585238 82 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 AL670379.6-201ENST00000603753 252 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 AL670379.1-201ENST00000604752 252 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 AL670379.5-201ENST00000605253 252 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 AL670379.8-201ENST00000605353 252 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 AL670379.7-201ENST00000605823 252 ntBASIC6.08□□□□□ -1.44
RC3H1Q5TC82 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RC3H1Q5TC82 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 RNU6-1078P-201ENST00000364522 103 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 SNORD115-46-201ENST00000390982 71 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 RN7SKP159-201ENST00000410657 292 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 AL358176.3-201ENST00000420757 454 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 RPL23AP22-201ENST00000437556 453 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 AC135721.1-201ENST00000497954 479 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 HMGB1P21-201ENST00000502313 581 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 NDUFB4P9-201ENST00000511646 388 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 HNRNPCP4-201ENST00000571636 900 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 MIR4504-201ENST00000577413 92 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 AL158032.1-201ENST00000605401 106 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 AL365265.1-201ENST00000621045 234 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 AL391684.1-202ENST00000641293 1636 ntBASIC6.07□□□□□ -1.44
RC3H1Q5TC82 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.07□□□□□ -1.44
RC3H1Q5TC82 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AL139039.1-201ENST00000401900 692 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 GNG5P5-201ENST00000420444 220 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AC091286.1-201ENST00000431233 461 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AL591704.1-201ENST00000432574 275 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 DAP3P1-201ENST00000441522 278 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AC109925.1-201ENST00000478069 331 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 ENPP7P11-201ENST00000505915 627 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AC008958.1-201ENST00000511047 682 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AF186190.1-201ENST00000517470 480 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AL591516.1-201ENST00000611326 274 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AC005344.1-201ENST00000613391 459 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AL589994.2-201ENST00000621124 579 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 MAPK10-304ENST00000641341 3984 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 AC063976.2-201ENST00000425667 3556 ntBASIC6.06□□□□□ -1.44
RC3H1Q5TC82 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RC3H1Q5TC82 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 SNORD82-201ENST00000365530 70 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms