Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL049714.1-201ENST00000466686 347 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC087884.1-201ENST00000469738 328 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC079203.1-201ENST00000487972 404 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC007182.2-201ENST00000489251 402 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 RNU6-1095P-201ENST00000516148 108 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AL512310.1-201ENST00000548639 172 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC106734.1-201ENST00000568646 663 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 RPP40P2-201ENST00000603596 712 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 SNRPGP19-201ENST00000603826 189 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC093838.1-201ENST00000613014 469 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC018926.3-201ENST00000618841 406 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 WWP1P1-201ENST00000466609 2769 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 RNA5SP125-201ENST00000364843 120 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AC092745.2-202ENST00000411880 369 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 VN1R36P-201ENST00000414936 291 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AL357078.2-201ENST00000416486 427 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AC096920.1-201ENST00000423991 241 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AL353729.1-201ENST00000425044 720 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AC104164.3-201ENST00000467363 1258 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 RPL21P99-201ENST00000480369 423 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 HSPE1P18-201ENST00000517602 280 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 CBX3P7-201ENST00000532876 502 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 UBE2L4-201ENST00000587688 464 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AL022099.1-201ENST00000604551 712 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AC012150.2-201ENST00000621300 544 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AC109454.4-201ENST00000623411 649 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 AP003400.5-201ENST00000624827 617 ntBASIC1.59□□□□□ -2.15
CCDC58Q4VC31 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 OR1L1-202ENST00000373686 1083 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 RNU6-19P-201ENST00000384718 107 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 RNA5SP425-201ENST00000410336 112 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 Z98742.2-201ENST00000431564 187 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 MTND4LP10-201ENST00000435146 291 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC104073.1-201ENST00000451988 151 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC106872.3-201ENST00000495104 446 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AL359273.1-201ENST00000510918 627 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC103783.1-201ENST00000520506 373 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC087276.1-201ENST00000529659 480 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 MTCYBP23-201ENST00000558717 1102 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AC003001.2-201ENST00000616294 831 ntBASIC1.58□□□□□ -2.16
CCDC58Q4VC31 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC58Q4VC31 RNU6-386P-201ENST00000362650 107 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 CISD1P1-201ENST00000393907 327 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 AL035405.1-201ENST00000400795 710 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC58Q4VC31 DPH3P2-201ENST00000422618 250 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 FO393419.3-201ENST00000428741 282 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 RPS20P24-201ENST00000457473 361 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC58Q4VC31 HMGB1P47-201ENST00000511281 589 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC58Q4VC31 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC58Q4VC31 MIR3921-201ENST00000577308 85 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 AL136981.2-201ENST00000617319 734 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 AC025048.6-202ENST00000627667 438 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 AL356118.1-201ENST00000635272 1078 ntBASIC1.57□□□□□ -2.16
CCDC58Q4VC31 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC58Q4VC31 RNU6-441P-201ENST00000384545 106 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC58Q4VC31 NPM1P10-201ENST00000398310 865 ntBASIC1.56□□□□□ -2.16
CCDC58Q4VC31 OR9R1P-201ENST00000412200 877 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms