Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AL442163.3-201ENST00000554110 156 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 HMGN2P47-201ENST00000559378 272 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AC005951.2-201ENST00000576282 495 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 CPDP1-201ENST00000579660 283 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 MIR3158-1-201ENST00000583596 81 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 MIR4282-201ENST00000583613 67 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AL158032.1-201ENST00000605401 106 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 FP236240.3-201ENST00000623061 327 ntBASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.9□□□□□ -1.63
RSPO4Q2I0M5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 ZNF299P-201ENST00000406845 1804 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RNU1-94P-201ENST00000362627 173 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 SNORA63.4-201ENST00000362763 126 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RNU4-90P-201ENST00000362773 141 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RNA5SP509-201ENST00000364577 119 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 U3.13-201ENST00000364804 214 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RNU1-136P-201ENST00000384181 164 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RNU6-729P-201ENST00000384399 107 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RPL11P3-201ENST00000395256 523 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RNU2-22P-201ENST00000411266 212 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL591704.1-201ENST00000432574 275 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL159987.2-201ENST00000432754 307 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 PIGFP3-201ENST00000441918 722 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL354714.3-201ENST00000447284 493 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AC010733.1-201ENST00000451515 401 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 HSPE1P25-201ENST00000455484 251 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RPL37P6-202ENST00000464216 403 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AC010409.1-201ENST00000487382 476 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.679-201ENST00000516416 91 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RN7SKP96-201ENST00000516948 297 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AC122688.1-201ENST00000541494 223 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 MIR4433B-201ENST00000581329 102 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 VN1R84P-201ENST00000593697 235 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL670379.6-201ENST00000603753 252 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL670379.1-201ENST00000604752 252 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL670379.2-201ENST00000604983 252 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL670379.5-201ENST00000605253 252 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL670379.8-201ENST00000605353 252 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL670379.7-201ENST00000605823 252 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.772-201ENST00000606692 102 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 HSPA8P4-201ENST00000511877 1920 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 AL592148.3-201ENST00000608771 2646 ntBASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO4Q2I0M5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 MIR208A-201ENST00000362287 71 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.218-201ENST00000364218 104 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 SNORA62.3-201ENST00000365110 153 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 SMIM11P1-201ENST00000369586 178 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 SNORD73A-201ENST00000386062 65 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AL591034.2-201ENST00000402839 359 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 RNU2-61P-201ENST00000411069 191 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 RPEP3-201ENST00000425462 676 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 MTCO1P39-201ENST00000426148 480 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 RPL23AP83-201ENST00000434984 473 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 AL445433.1-201ENST00000457507 257 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.638-201ENST00000459374 113 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 PLGLA-201ENST00000465668 449 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 RPS27AP1-201ENST00000475545 471 ntBASIC4.88□□□□□ -1.63
RSPO4Q2I0M5 HMGN2P13-201ENST00000476476 274 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms