Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 AL445183.3-201ENST00000414168 502 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 NDUFA5P4-201ENST00000436704 385 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 MTCO1P42-201ENST00000457379 726 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 MTCYBP17-201ENST00000503579 789 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 HMGB1P22-201ENST00000505315 124 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 RMST_10.1-201ENST00000616309 154 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1SQ13698 AL109809.4-201ENST00000603520 2185 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1SQ13698 VN1R42P-201ENST00000424651 344 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 SETP11-201ENST00000473027 690 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 AC090453.1-201ENST00000495560 436 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 AC048346.1-201ENST00000510247 144 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 SNRPGP16-201ENST00000533275 226 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 CBX3P4-201ENST00000538909 354 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 AL354696.1-201ENST00000614652 497 ntBASIC2.18□□□□□ -2.06
CACNA1SQ13698 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.18□□□□□ -2.06
CACNA1SQ13698 MIR337-201ENST00000362281 93 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 MIR7-2-201ENST00000384970 110 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 MIR1276-201ENST00000408707 83 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 RNA5SP38-201ENST00000410750 119 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 AC092638.1-201ENST00000411966 1275 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 RPS7P9-201ENST00000414704 586 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1SQ13698 RPL7P37-201ENST00000425095 738 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 EZH2P1-201ENST00000431167 291 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1SQ13698 AC004022.1-201ENST00000447766 1066 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 RPS27P23-201ENST00000487608 251 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 AC107393.1-201ENST00000512403 346 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 ERHP1-201ENST00000523006 310 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CACNA1SQ13698 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CACNA1SQ13698 EEF1B2P4-201ENST00000551398 348 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 AC106791.2-201ENST00000604680 391 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 AC018755.4-201ENST00000619715 454 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CACNA1SQ13698 AC027514.1-201ENST00000588561 1603 ntBASIC2.17□□□□□ -2.06
CACNA1SQ13698 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1SQ13698 SET-203ENST00000372688 801 ntTSL 2 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 ANAPC10P1-201ENST00000395991 556 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 UBE2V1P15-201ENST00000407776 448 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC004965.1-201ENST00000413033 213 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 RABEPKP1-201ENST00000440529 1026 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC026616.1-201ENST00000523157 525 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 MIR502-201ENST00000606349 86 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1SQ13698 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1SQ13698 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC130650.2-201ENST00000618736 2403 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1SQ13698 RNU6-796P-201ENST00000391086 107 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1SQ13698 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1SQ13698 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 BX248409.1-201ENST00000455497 255 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AL031183.1-201ENST00000457667 207 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC016065.2-201ENST00000514530 444 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 RNU6-27P-201ENST00000516146 107 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC125611.2-201ENST00000551907 647 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 OR4G1P-201ENST00000588632 938 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1SQ13698 BX248123.2-201ENST00000606318 124 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1SQ13698 AL121594.5-201ENST00000631724 573 ntBASIC2.16□□□□□ -2.06
CACNA1SQ13698 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.15□□□□□ -2.06
CACNA1SQ13698 SNORD56.4-201ENST00000363883 71 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 RNU6-619P-201ENST00000365146 108 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 RNU6-53P-201ENST00000365367 106 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 MIR499A-201ENST00000384903 122 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CACNA1SQ13698 AL121978.1-201ENST00000402778 359 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 RPL17P12-201ENST00000413391 526 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 AL645568.3-201ENST00000433683 316 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 BTBD7P2-201ENST00000441962 620 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 RAB11AP1-201ENST00000442978 646 ntBASIC2.15□□□□□ -2.07
CACNA1SQ13698 UBBP3-201ENST00000445497 241 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms