Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RPL35AP12-201ENST00000425362 338 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.71□□□□□ -1.66
SSRP1Q08945 FABP5P13-201ENST00000452144 328 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 snoU13.24-201ENST00000458998 104 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC007547.1-201ENST00000462177 490 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 RPL21P8-201ENST00000465083 535 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 HSPE1P6-201ENST00000479457 291 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSRP1Q08945 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.71□□□□□ -1.66
SSRP1Q08945 Vault.1-201ENST00000516474 102 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 RNU6-685P-201ENST00000517088 95 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 RNU6-1314P-201ENST00000517139 104 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 NARSP2-201ENST00000518524 679 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 BTF3P12-201ENST00000519620 469 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.71□□□□□ -1.66
SSRP1Q08945 MTND4P7-201ENST00000523876 130 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSRP1Q08945 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.71□□□□□ -1.66
SSRP1Q08945 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.71□□□□□ -1.66
SSRP1Q08945 DYNLL1P4-201ENST00000549314 266 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC025884.1-201ENST00000556034 378 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC010928.3-201ENST00000587712 541 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.71□□□□□ -1.66
SSRP1Q08945 AC104763.2-201ENST00000604179 382 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC007619.2-201ENST00000605743 379 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AL365204.3-201ENST00000612448 685 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC012409.4-201ENST00000612923 249 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AL390240.1-201ENST00000612950 384 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AC009248.2-201ENST00000619826 254 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AL359697.1-201ENST00000624879 587 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AL773545.4-201ENST00000637262 310 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 AL513478.4-201ENST00000641636 310 ntBASIC4.71□□□□□ -1.66
SSRP1Q08945 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSRP1Q08945 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.71□□□□□ -1.66
SSRP1Q08945 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SSRP1Q08945 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
SSRP1Q08945 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
SSRP1Q08945 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SSRP1Q08945 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSRP1Q08945 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.7□□□□□ -1.66
SSRP1Q08945 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSRP1Q08945 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSRP1Q08945 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSRP1Q08945 Y_RNA.100-201ENST00000363141 102 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 SNORD74.4-201ENST00000364129 80 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSRP1Q08945 RNU6-190P-201ENST00000384154 102 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 RNU6-550P-201ENST00000391057 101 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 RNU6-510P-201ENST00000391239 108 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 SNORA3C-201ENST00000408792 125 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 Y_RNA.615-201ENST00000410769 117 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 ARL5AP1-201ENST00000418991 388 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 RPL21P112-201ENST00000434403 463 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AC068587.1-201ENST00000483613 781 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AC108860.1-201ENST00000484521 383 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 RN7SL271P-201ENST00000487601 295 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AC106872.2-201ENST00000494303 480 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 RBBP4P6-201ENST00000508098 202 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 RN7SKP122-201ENST00000515923 296 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AC022690.1-201ENST00000526681 550 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AL137161.1-201ENST00000532231 390 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AC087241.2-201ENST00000535801 324 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.7□□□□□ -1.66
SSRP1Q08945 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.7□□□□□ -1.66
SSRP1Q08945 AC005951.2-201ENST00000576282 495 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 VN1R80P-201ENST00000597126 338 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AC015813.4-201ENST00000610469 179 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSRP1Q08945 AL357559.1-201ENST00000622228 274 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.7□□□□□ -1.66
SSRP1Q08945 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSRP1Q08945 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SSRP1Q08945 SDAD1P2-201ENST00000441308 2028 ntBASIC4.7□□□□□ -1.66
SSRP1Q08945 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SSRP1Q08945 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.7□□□□□ -1.66
SSRP1Q08945 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.69□□□□□ -1.66
SSRP1Q08945 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SSRP1Q08945 PRO1804-201ENST00000623780 2050 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AC087190.4-201ENST00000574616 8334 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SSRP1Q08945 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SSRP1Q08945 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SSRP1Q08945 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SSRP1Q08945 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SSRP1Q08945 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSRP1Q08945 MIR448-201ENST00000362131 111 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 RNU5A-1-201ENST00000362698 116 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 SNORD81.2-201ENST00000365153 76 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 Y_RNA.356-201ENST00000365475 113 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 SNORA32.2-201ENST00000384049 122 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AL592114.1-201ENST00000403842 483 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 SNORA11-201ENST00000408789 128 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 RN7SKP32-201ENST00000410167 303 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 KCTD9P3-201ENST00000434597 1169 ntBASIC4.69□□□□□ -1.66
SSRP1Q08945 AL162388.1-201ENST00000450912 352 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms