Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC009159.2-201ENST00000617603 606 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AC008443.7-201ENST00000622195 246 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 CR381653.2-201ENST00000624041 768 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AL136164.4-201ENST00000625013 2135 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GABPAQ06546 AP000526.1-201ENST00000603308 1388 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AC009812.4-201ENST00000569134 1805 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
GABPAQ06546 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
GABPAQ06546 RNU6-359P-201ENST00000365466 108 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 MTCO1P17-201ENST00000411522 491 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.1□□□□□ -1.91
GABPAQ06546 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.1□□□□□ -1.91
GABPAQ06546 UBE2D3P2-201ENST00000424409 445 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.1□□□□□ -1.91
GABPAQ06546 MTND1P20-201ENST00000430341 950 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 YWHAZP7-201ENST00000436906 631 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 SSXP4-201ENST00000451349 245 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AC021382.1-201ENST00000483523 359 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AC108860.1-201ENST00000484521 383 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.1□□□□□ -1.91
GABPAQ06546 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.1□□□□□ -1.91
GABPAQ06546 AC109329.2-201ENST00000519658 482 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.1□□□□□ -1.91
GABPAQ06546 AC243972.3-201ENST00000539655 198 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.1□□□□□ -1.91
GABPAQ06546 AC125611.2-201ENST00000551907 647 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AL391156.1-201ENST00000554965 554 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AL355836.1-201ENST00000555951 870 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 OR4H12P-201ENST00000556269 907 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.1□□□□□ -1.91
GABPAQ06546 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.1□□□□□ -1.91
GABPAQ06546 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.1□□□□□ -1.91
GABPAQ06546 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.1□□□□□ -1.91
GABPAQ06546 AC097468.3-201ENST00000607956 456 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.1□□□□□ -1.91
GABPAQ06546 AP002826.1-201ENST00000608835 315 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AC072039.2-201ENST00000608883 439 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
GABPAQ06546 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
GABPAQ06546 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
GABPAQ06546 AC104454.1-201ENST00000421341 1401 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 AC010733.2-201ENST00000589496 5702 ntBASIC3.1□□□□□ -1.91
GABPAQ06546 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GABPAQ06546 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GABPAQ06546 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.09□□□□□ -1.91
GABPAQ06546 AC092447.10-201ENST00000620607 1652 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 RNU6-853P-201ENST00000364306 107 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.09□□□□□ -1.91
GABPAQ06546 RNU6-301P-201ENST00000384277 107 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 RPS3AP24-201ENST00000407896 734 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
GABPAQ06546 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 RPLP0P7-201ENST00000416050 667 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 TRIAP1P1-201ENST00000427062 225 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.09□□□□□ -1.91
GABPAQ06546 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.09□□□□□ -1.91
GABPAQ06546 AL513328.1-201ENST00000446460 224 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 AL592447.1-201ENST00000447592 540 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 AC093809.1-201ENST00000509155 340 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 AC022483.1-201ENST00000514020 567 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 AL133271.1-201ENST00000538229 291 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.09□□□□□ -1.91
GABPAQ06546 MIR4635-201ENST00000583759 79 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.09□□□□□ -1.91
GABPAQ06546 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.09□□□□□ -1.91
GABPAQ06546 AC140725.3-201ENST00000616193 880 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
GABPAQ06546 AP000770.2-201ENST00000623694 100 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 IGHVIII-44-202ENST00000636235 289 ntBASIC3.09□□□□□ -1.91
GABPAQ06546 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
GABPAQ06546 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.09□□□□□ -1.92
GABPAQ06546 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GABPAQ06546 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
GABPAQ06546 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
GABPAQ06546 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
GABPAQ06546 Y_RNA.18-201ENST00000362461 102 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 RNU6-433P-201ENST00000363216 104 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 RNU6-1078P-201ENST00000364522 103 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 RNU6-114P-201ENST00000384704 105 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AL590004.2-201ENST00000404787 371 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
GABPAQ06546 AC098592.1-201ENST00000419352 333 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 MTATP6P4-201ENST00000427725 675 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.08□□□□□ -1.92
GABPAQ06546 AC244505.4-201ENST00000434905 287 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 UBE2V1P13-201ENST00000436983 439 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 HIGD1AP11-201ENST00000438361 280 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AL008629.1-201ENST00000438615 184 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 SSXP5-201ENST00000443473 287 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms