| MUC3A | Q02505 | Y_RNA.48-201 | ENST00000362710 | 103 nt | BASIC | 1.09 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | LINC01821-201 | ENST00000419786 | 1084 nt | TSL 1 (best) BASIC | 1.09 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL121871.1-201 | ENST00000443413 | 436 nt | BASIC | 1.09 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | PGRMC2-204 | ENST00000503872 | 1028 nt | TSL 3 BASIC | 1.09 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | PTP4A1-204 | ENST00000578299 | 135 nt | TSL 2 BASIC | 1.09 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | CCDC148-202 | ENST00000409187 | 2523 nt | APPRIS P1 TSL 5 BASIC | 1.09 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL096701.2-201 | ENST00000416920 | 238 nt | BASIC | 1.09 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | JKAMP-212 | ENST00000556985 | 592 nt | TSL 2 BASIC | 1.09 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | ATP6V1G3-202 | ENST00000309309 | 678 nt | TSL 5 BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | XIAPP3-201 | ENST00000312918 | 795 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RNA5SP239-201 | ENST00000410218 | 129 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL590233.1-201 | ENST00000430017 | 456 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC017048.2-201 | ENST00000431455 | 822 nt | TSL 3 BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL589935.1-209 | ENST00000432050 | 418 nt | TSL 5 BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | HMGB3P21-201 | ENST00000452483 | 547 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC007495.2-201 | ENST00000562822 | 459 nt | TSL 3 BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | MIR6857-201 | ENST00000613267 | 93 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | ZNF37BP-203 | ENST00000452306 | 1352 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RNU6-666P-201 | ENST00000363499 | 107 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | SSXP10-201 | ENST00000402595 | 565 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC234775.1-201 | ENST00000454247 | 670 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | CFHR2-203 | ENST00000476712 | 1020 nt | APPRIS ALT2 TSL 3 BASIC | 1.08 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | MIR1912-201 | ENST00000410389 | 80 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL357873.1-201 | ENST00000449215 | 282 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | BCL2L11-225 | ENST00000640419 | 249 nt | APPRIS ALT2 TSL 5 BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | SLC25A46-206 | ENST00000509432 | 1596 nt | TSL 2 BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | MFSD8-213 | ENST00000641134 | 1327 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL390774.2-201 | ENST00000423942 | 788 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | NETO1-202 | ENST00000397929 | 1849 nt | TSL 1 (best) BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RRAS2-211 | ENST00000537760 | 2034 nt | TSL 2 BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC007390.1-201 | ENST00000415722 | 356 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC007098.1-201 | ENST00000420122 | 367 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL353771.1-201 | ENST00000422107 | 457 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC115618.2-201 | ENST00000453810 | 450 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC107982.2-201 | ENST00000577360 | 463 nt | TSL 5 BASIC | 1.07 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | NUP35P2-201 | ENST00000416748 | 943 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC145141.1-201 | ENST00000510180 | 567 nt | TSL 4 BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC008083.3-202 | ENST00000552063 | 277 nt | TSL 3 BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC024619.4-201 | ENST00000580924 | 316 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | uc_338.22-201 | ENST00000622722 | 187 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | FO680682.1-201 | ENST00000421261 | 345 nt | TSL 3 BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | LINC01899-201 | ENST00000580323 | 312 nt | TSL 5 BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | ZRANB2-AS2-212 | ENST00000590186 | 686 nt | TSL 5 BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC016877.3-201 | ENST00000606778 | 504 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC007179.2-204 | ENST00000444001 | 765 nt | TSL 3 BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | TTN-AS1-212 | ENST00000582847 | 1036 nt | TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | CRISP3-204 | ENST00000433368 | 2205 nt | APPRIS ALT2 TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL591475.1-201 | ENST00000429060 | 489 nt | TSL 2 BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC097375.2-201 | ENST00000510416 | 579 nt | TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC006499.2-201 | ENST00000513470 | 337 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | MIR6759-201 | ENST00000638110 | 65 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | OR8H1-201 | ENST00000313022 | 1038 nt | APPRIS P2 BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RPL31P63-201 | ENST00000422565 | 375 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC233728.2-201 | ENST00000425348 | 757 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL031659.1-201 | ENST00000447075 | 539 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | CFTRP1-201 | ENST00000456646 | 183 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | SUMO2P4-201 | ENST00000504193 | 276 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC104233.2-201 | ENST00000518922 | 414 nt | TSL 3 BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | ZFAND1-217 | ENST00000521895 | 885 nt | TSL 3 BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC104115.2-201 | ENST00000523026 | 687 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC087465.1-201 | ENST00000560574 | 245 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC146944.4-201 | ENST00000602697 | 718 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC011890.2-201 | ENST00000613393 | 294 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | TRAPPC2P5-201 | ENST00000426293 | 308 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RPS20P10-201 | ENST00000451209 | 253 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC073901.1-201 | ENST00000462471 | 408 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RPL30P12-201 | ENST00000474666 | 353 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC006483.1-201 | ENST00000487308 | 313 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | DEFB108E-201 | ENST00000524692 | 240 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | LINC02300-201 | ENST00000549742 | 665 nt | TSL 4 BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RNU4-38P-201 | ENST00000364472 | 129 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | HMGB1P13-201 | ENST00000406019 | 642 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | ANKRD62P1-PARP4P3-201 | ENST00000456726 | 1181 nt | TSL 5 BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC138473.1-201 | ENST00000605717 | 526 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC024595.1-201 | ENST00000623088 | 387 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | OR5AQ1P-202 | ENST00000641257 | 1534 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | COPS2-203 | ENST00000542928 | 1580 nt | TSL 2 BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | DEFB128-201 | ENST00000334391 | 373 nt | APPRIS P1 TSL 1 (best) BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RNA5SP465-201 | ENST00000391195 | 109 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC092839.1-201 | ENST00000433475 | 536 nt | TSL 4 BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC096571.1-202 | ENST00000506634 | 735 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC109464.3-201 | ENST00000509456 | 204 nt | TSL 5 BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC026894.1-202 | ENST00000533843 | 477 nt | TSL 5 BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | ZRANB2-AS2-222 | ENST00000625045 | 1014 nt | TSL 5 BASIC | 1.04 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC013470.3-201 | ENST00000420252 | 1194 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC093852.1-201 | ENST00000503587 | 266 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | MTCYBP37-201 | ENST00000510642 | 1133 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | CADM2-AS1-201 | ENST00000476021 | 2656 nt | TSL 1 (best) BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | U8.9-201 | ENST00000365667 | 134 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL357078.2-201 | ENST00000416486 | 427 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | RPL26P9-201 | ENST00000457466 | 433 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AC010451.2-201 | ENST00000511514 | 545 nt | TSL 4 BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AL133372.3-201 | ENST00000553082 | 821 nt | TSL 3 BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | AGTR1-204 | ENST00000418473 | 2071 nt | TSL 5 BASIC | 1.03 | □□□□□ -2.24 | | |
| MUC3A | Q02505 | ICE2P2-201 | ENST00000483823 | 2787 nt | BASIC | 1.03 | □□□□□ -2.25 | | |
| MUC3A | Q02505 | BRDT-206 | ENST00000402388 | 3125 nt | APPRIS P3 TSL 1 (best) BASIC | 1.03 | □□□□□ -2.25 | | |
| MUC3A | Q02505 | CNOT6LP1-201 | ENST00000559681 | 1462 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| MUC3A | Q02505 | LINC01766-201 | ENST00000453968 | 362 nt | TSL 3 BASIC | 1.02 | □□□□□ -2.25 | | |