Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNU2-52P-201ENST00000410680 190 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 MTCYBP38-201ENST00000417160 1123 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC019097.1-201ENST00000424783 735 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 MTND3P1-201ENST00000441336 220 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AL606517.1-201ENST00000446914 387 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 MEMO1P3-201ENST00000459811 302 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 RPL30P9-201ENST00000465586 330 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 RPL7P18-201ENST00000478965 734 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 RPS27P27-201ENST00000498779 255 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC090136.1-201ENST00000520009 240 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 HMGB1P41-201ENST00000520234 440 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 OR6C7P-201ENST00000547875 934 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AGGF1P5-201ENST00000567900 919 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC090615.1-201ENST00000577519 154 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC011260.1-201ENST00000578420 472 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 MIR3609-201ENST00000582661 80 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 MIR3670-2-201ENST00000582974 65 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 MIR3670-1-201ENST00000584160 65 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 MIR3670-3-201ENST00000584855 65 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC008739.2-201ENST00000597006 317 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 BBIP1P1-201ENST00000602999 279 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 OR2AS2P-201ENST00000606902 342 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 MIR3670-4-201ENST00000612260 65 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC006213.4-201ENST00000616184 634 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AP000484.1-201ENST00000620067 1252 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC027309.3-201ENST00000623419 351 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AC110079.1-202ENST00000635213 138 ntBASIC2.44□□□□□ -2.02
HMGCS1Q01581 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HMGCS1Q01581 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HMGCS1Q01581 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HMGCS1Q01581 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC062016.1-201ENST00000355719 319 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 RNU6-289P-201ENST00000364093 107 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 SNORA25.6-201ENST00000364121 118 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 RNU6-83P-201ENST00000384568 112 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 RPS3AP24-201ENST00000407896 734 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 RNU6-757P-201ENST00000410334 100 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 RNU2-25P-201ENST00000411041 191 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 RNA5SP184-201ENST00000411071 108 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AL513477.1-202ENST00000417061 214 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 RPL27AP8-201ENST00000424277 446 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 THAP5P1-201ENST00000439089 262 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AP000936.2-201ENST00000447151 681 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC234775.1-201ENST00000454247 670 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC109464.2-201ENST00000510242 943 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC096725.1-201ENST00000514266 313 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 RNU6-714P-201ENST00000516963 103 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 MTND4P33-201ENST00000556706 766 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 HMGB1P6-201ENST00000569046 646 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC013444.2-201ENST00000603317 787 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AP000787.2-201ENST00000604432 568 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC007349.4-201ENST00000608114 532 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC097478.2-201ENST00000610572 514 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AL450472.3-201ENST00000615578 367 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HMGCS1Q01581 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.43□□□□□ -2.02
HMGCS1Q01581 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HMGCS1Q01581 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HMGCS1Q01581 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
HMGCS1Q01581 AC006378.2-201ENST00000623178 2476 ntBASIC2.42□□□□□ -2.02
HMGCS1Q01581 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HMGCS1Q01581 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HMGCS1Q01581 AC005539.1-201ENST00000443768 1479 ntBASIC2.42□□□□□ -2.02
HMGCS1Q01581 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGCS1Q01581 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms