Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 HMGB3P3-201ENST00000510526 400 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 MTCO1P47-201ENST00000523889 1271 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN7AQ01118 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN7AQ01118 AC135776.4-201ENST00000624300 1904 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 AP000648.3-201ENST00000623539 4507 ntBASIC1.63□□□□□ -2.15
SCN7AQ01118 RNA5SP139-201ENST00000364340 117 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 RNU6-234P-201ENST00000365229 104 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 RNU6-1181P-201ENST00000384191 106 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SCN7AQ01118 AC023347.2-201ENST00000433994 462 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 KATNBL1P3-201ENST00000443475 909 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 RN7SKP49-201ENST00000516675 260 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 NPM1P52-201ENST00000518264 846 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 IGKV2D-36-201ENST00000518643 226 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 AP005660.1-201ENST00000522972 293 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 AC135279.1-201ENST00000543493 504 ntBASIC1.62□□□□□ -2.15
SCN7AQ01118 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.62□□□□□ -2.15
SCN7AQ01118 AL033519.2-201ENST00000403958 392 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.61□□□□□ -2.15
SCN7AQ01118 RNU7-27P-201ENST00000459281 62 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 RPS23P3-201ENST00000470993 430 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 NCOR1P1-202ENST00000486162 291 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.61□□□□□ -2.15
SCN7AQ01118 AP003117.1-201ENST00000602771 554 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SCN7AQ01118 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.61□□□□□ -2.15
SCN7AQ01118 MTCO1P4-201ENST00000520516 1409 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 RNA5SP325-201ENST00000363756 130 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 MIR627-201ENST00000384979 97 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 AC093716.1-201ENST00000435923 377 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 AC087879.1-201ENST00000474343 374 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 LARP7P4-201ENST00000481075 878 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 HMGB1P38-201ENST00000490557 577 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 AP003033.1-201ENST00000527244 415 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 AC125611.2-201ENST00000551907 647 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.61□□□□□ -2.15
SCN7AQ01118 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.61□□□□□ -2.15
SCN7AQ01118 AC015849.6-201ENST00000605454 474 ntBASIC1.61□□□□□ -2.15
SCN7AQ01118 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.6□□□□□ -2.15
SCN7AQ01118 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SCN7AQ01118 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SCN7AQ01118 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SCN7AQ01118 RNA5SP498-201ENST00000411342 120 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 RPL35AP22-201ENST00000436855 335 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 RPL21P134-201ENST00000453468 483 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 AP002345.1-201ENST00000456493 928 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.6□□□□□ -2.15
SCN7AQ01118 AC008885.2-201ENST00000509506 930 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 RN7SKP277-201ENST00000516895 283 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 SNORA31.23-201ENST00000517219 133 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 AC090821.2-201ENST00000523552 176 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 AC022690.1-201ENST00000526681 550 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.6□□□□□ -2.15
SCN7AQ01118 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.6□□□□□ -2.15
SCN7AQ01118 AC109446.2-201ENST00000567872 497 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.6□□□□□ -2.15
SCN7AQ01118 AC097468.3-201ENST00000607956 456 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 AC006329.2-201ENST00000611491 394 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 AL356118.1-201ENST00000635272 1078 ntBASIC1.6□□□□□ -2.15
SCN7AQ01118 AC099654.7-201ENST00000635788 2127 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SCN7AQ01118 RNU6-203P-201ENST00000384038 104 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 HNRNPDP2-201ENST00000406475 478 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 MTCYBP7-201ENST00000419540 1134 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.59□□□□□ -2.15
SCN7AQ01118 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SCN7AQ01118 MRPL42P6-201ENST00000486397 371 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 AC107398.1-201ENST00000486904 505 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 AC133963.2-201ENST00000513686 578 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 RNU6-1073P-201ENST00000517182 106 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.59□□□□□ -2.15
SCN7AQ01118 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.59□□□□□ -2.15
SCN7AQ01118 AL137100.2-201ENST00000555786 315 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 MTATP6P3-201ENST00000581686 676 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.59□□□□□ -2.15
SCN7AQ01118 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.59□□□□□ -2.15
SCN7AQ01118 AL161734.1-201ENST00000609720 557 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 FAM157B-203ENST00000639350 358 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 MKKS-204ENST00000639674 192 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 MTND5P10-201ENST00000603719 1809 ntBASIC1.59□□□□□ -2.15
SCN7AQ01118 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.59□□□□□ -2.16
SCN7AQ01118 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SCN7AQ01118 RPS12P24-201ENST00000412619 387 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 RPL21P32-201ENST00000419877 477 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 MTND2P8-201ENST00000450555 1025 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN7AQ01118 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN7AQ01118 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN7AQ01118 MTCYBP41-201ENST00000528913 1123 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 OSBPL9P3-201ENST00000534523 595 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 AC016957.1-201ENST00000534895 309 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 CBX3P2-202ENST00000583365 535 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 MIR6788-201ENST00000618842 66 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SCN7AQ01118 SRIP3-201ENST00000413200 219 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 AC004022.2-201ENST00000413824 193 ntBASIC1.58□□□□□ -2.16
SCN7AQ01118 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.58□□□□□ -2.16
SCN7AQ01118 AC233728.2-201ENST00000425348 757 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms