Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AL078603.1-201ENST00000603824 313 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AL136363.1-201ENST00000605349 337 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AC140725.3-201ENST00000616193 880 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.42□□□□□ -2.18
ABCA4P78363 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 UBE2L2-201ENST00000254302 429 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 MIRLET7G-201ENST00000362280 84 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 RNU6-173P-201ENST00000364215 104 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.42□□□□□ -2.18
ABCA4P78363 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.42□□□□□ -2.18
ABCA4P78363 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.42□□□□□ -2.18
ABCA4P78363 AC009238.1-201ENST00000442165 424 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AL121871.1-201ENST00000443413 436 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.42□□□□□ -2.18
ABCA4P78363 AC009237.6-201ENST00000446969 424 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 RNU7-26P-201ENST00000458980 63 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.42□□□□□ -2.18
ABCA4P78363 AC067805.1-201ENST00000559344 470 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.42□□□□□ -2.18
ABCA4P78363 AC135803.1-201ENST00000608748 565 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AL360181.4-201ENST00000621752 134 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 MTND4P1-201ENST00000457501 1466 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 Y_RNA.493-201ENST00000384422 102 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 MIR144-201ENST00000384886 86 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 AL136372.1-201ENST00000403060 228 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 HMGB3P2-201ENST00000411913 584 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 AL136133.1-201ENST00000413694 376 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ABCA4P78363 GTF2IP7-202ENST00000436677 309 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA4P78363 AC104689.1-201ENST00000473356 768 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 AL135752.1-201ENST00000479477 471 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 RPS29P20-201ENST00000489592 171 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 RPPH1-2P-201ENST00000516688 293 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ABCA4P78363 AC098848.2-201ENST00000588023 330 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 RPS15AP11-201ENST00000594193 385 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 AC092474.3-201ENST00000603022 568 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.41□□□□□ -2.18
ABCA4P78363 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.41□□□□□ -2.18
ABCA4P78363 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.41□□□□□ -2.18
ABCA4P78363 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ABCA4P78363 MIR96-201ENST00000362288 78 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 RNU6-386P-201ENST00000362650 107 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
ABCA4P78363 RNU6-174P-201ENST00000410406 106 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 RN7SKP101-201ENST00000411376 320 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 ARL2BPP3-201ENST00000421226 480 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCA4P78363 HMGN2P19-201ENST00000425149 265 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 AL358075.3-201ENST00000426289 226 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA4P78363 AC097499.1-201ENST00000444277 208 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 AL627224.1-201ENST00000448334 444 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCA4P78363 AL121594.1-201ENST00000475906 575 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 AF131216.2-201ENST00000512316 564 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA4P78363 AL138976.2-201ENST00000563989 694 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA4P78363 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA4P78363 BNIP3P7-201ENST00000605641 516 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 MIR203B-201ENST00000636080 86 ntBASIC1.41□□□□□ -2.18
ABCA4P78363 AC093536.2-201ENST00000565257 1406 ntBASIC1.4□□□□□ -2.18
ABCA4P78363 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 RNU4-72P-201ENST00000410754 173 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 UBE2V1P9-201ENST00000414760 368 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 UBE2V1P6-201ENST00000430840 422 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 ARPC3P1-201ENST00000437218 533 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA4P78363 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.4□□□□□ -2.19
ABCA4P78363 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA4P78363 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA4P78363 AC113155.1-201ENST00000511141 769 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA4P78363 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA4P78363 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA4P78363 AC103987.3-201ENST00000582071 292 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AL158801.5-201ENST00000623123 465 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ABCA4P78363 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA4P78363 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
ABCA4P78363 RNU6-1243P-201ENST00000364028 107 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ABCA4P78363 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
ABCA4P78363 OFD1P18Y-201ENST00000420889 959 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.4□□□□□ -2.19
ABCA4P78363 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ABCA4P78363 AL109741.2-201ENST00000455561 343 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AP002345.1-201ENST00000456493 928 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AC097493.1-201ENST00000463958 372 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 AC079203.1-201ENST00000487972 404 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 PCNAP1-201ENST00000505363 709 ntBASIC1.4□□□□□ -2.19
ABCA4P78363 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
ABCA4P78363 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms