Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SNORA31.22-201ENST00000517204 135 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC103783.1-201ENST00000520506 373 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.24□□□□□ -2.05
TPM4P67936 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TPM4P67936 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.24□□□□□ -2.05
TPM4P67936 EIF4BP1-201ENST00000554881 351 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC104229.1-201ENST00000561364 255 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.24□□□□□ -2.05
TPM4P67936 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.24□□□□□ -2.05
TPM4P67936 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TPM4P67936 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.24□□□□□ -2.05
TPM4P67936 AL450336.1-201ENST00000605180 586 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC080013.4-201ENST00000607624 649 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AL512506.2-201ENST00000624472 458 ntBASIC2.24□□□□□ -2.05
TPM4P67936 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.24□□□□□ -2.05
TPM4P67936 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TPM4P67936 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.24□□□□□ -2.05
TPM4P67936 ZNF849P-201ENST00000594711 1566 ntBASIC2.23□□□□□ -2.05
TPM4P67936 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM4P67936 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM4P67936 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.23□□□□□ -2.05
TPM4P67936 AC236972.1-201ENST00000433225 199 ntBASIC2.23□□□□□ -2.05
TPM4P67936 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.23□□□□□ -2.05
TPM4P67936 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.23□□□□□ -2.05
TPM4P67936 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM4P67936 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM4P67936 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM4P67936 RNU6-885P-201ENST00000516607 104 ntBASIC2.23□□□□□ -2.05
TPM4P67936 RNU7-193P-201ENST00000516723 65 ntBASIC2.23□□□□□ -2.05
TPM4P67936 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM4P67936 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.23□□□□□ -2.05
TPM4P67936 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
TPM4P67936 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TPM4P67936 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM4P67936 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM4P67936 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM4P67936 MIR5571-201ENST00000577998 113 ntBASIC2.23□□□□□ -2.05
TPM4P67936 DNAJC19P3-201ENST00000594491 331 ntBASIC2.23□□□□□ -2.05
TPM4P67936 AC107214.2-201ENST00000608204 634 ntBASIC2.23□□□□□ -2.05
TPM4P67936 AL590099.1-201ENST00000615276 138 ntBASIC2.23□□□□□ -2.05
TPM4P67936 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TPM4P67936 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TPM4P67936 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.22□□□□□ -2.05
TPM4P67936 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TPM4P67936 RNU6-217P-201ENST00000384164 104 ntBASIC2.22□□□□□ -2.05
TPM4P67936 MTCO2P31-201ENST00000402702 684 ntBASIC2.22□□□□□ -2.05
TPM4P67936 HMGB1P17-201ENST00000403495 628 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TPM4P67936 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.22□□□□□ -2.05
TPM4P67936 PIGFP3-201ENST00000441918 722 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TPM4P67936 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TPM4P67936 MRPS17P3-201ENST00000465453 385 ntBASIC2.22□□□□□ -2.05
TPM4P67936 DYNLL1P5-201ENST00000467158 270 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AL049874.1-201ENST00000489560 388 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AC096571.1-202ENST00000506634 735 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AC022447.1-201ENST00000515358 464 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.22□□□□□ -2.05
TPM4P67936 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM4P67936 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM4P67936 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM4P67936 AC026464.5-201ENST00000562497 722 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM4P67936 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.22□□□□□ -2.05
TPM4P67936 AC012493.3-201ENST00000604494 112 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AC025588.2-201ENST00000604851 466 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AC005000.2-201ENST00000605468 310 ntBASIC2.22□□□□□ -2.05
TPM4P67936 DUXAP10-204ENST00000612052 616 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AC008498.1-201ENST00000613012 531 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AC010378.1-201ENST00000619270 362 ntBASIC2.22□□□□□ -2.05
TPM4P67936 AL445493.3-201ENST00000619568 477 ntBASIC2.22□□□□□ -2.05
TPM4P67936 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.22□□□□□ -2.05
TPM4P67936 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
TPM4P67936 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.22□□□□□ -2.05
TPM4P67936 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TPM4P67936 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TPM4P67936 MIR208A-201ENST00000362287 71 ntBASIC2.21□□□□□ -2.06
TPM4P67936 HMGB1P49-201ENST00000418882 569 ntBASIC2.21□□□□□ -2.06
TPM4P67936 VN1R42P-201ENST00000424651 344 ntBASIC2.21□□□□□ -2.06
TPM4P67936 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM4P67936 OR10R1P-201ENST00000441524 1141 ntBASIC2.21□□□□□ -2.06
TPM4P67936 GPM6BP3-201ENST00000442797 145 ntBASIC2.21□□□□□ -2.06
TPM4P67936 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.21□□□□□ -2.06
TPM4P67936 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM4P67936 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.21□□□□□ -2.06
TPM4P67936 AP1S2P1-201ENST00000457344 379 ntBASIC2.21□□□□□ -2.06
TPM4P67936 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.21□□□□□ -2.06
TPM4P67936 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM4P67936 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.21□□□□□ -2.06
TPM4P67936 LARP7P2-201ENST00000575306 125 ntBASIC2.21□□□□□ -2.06
TPM4P67936 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.21□□□□□ -2.06
TPM4P67936 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.21□□□□□ -2.06
TPM4P67936 AC016911.1-201ENST00000613297 452 ntBASIC2.21□□□□□ -2.06
TPM4P67936 AL162233.1-201ENST00000620014 944 ntBASIC2.21□□□□□ -2.06
TPM4P67936 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.21□□□□□ -2.06
TPM4P67936 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TPM4P67936 OR4G2P-202ENST00000641004 1759 ntBASIC2.21□□□□□ -2.06
TPM4P67936 DBF4P1-201ENST00000412976 1892 ntBASIC2.2□□□□□ -2.06
TPM4P67936 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.2□□□□□ -2.06
TPM4P67936 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms