Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL109755.1-201ENST00000401791 649 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RNU2-21P-201ENST00000410368 188 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RNA5SP111-201ENST00000411386 101 ntBASIC4.5□□□□□ -1.69
YBX1P67809 Z99755.1-201ENST00000414048 380 ntBASIC4.5□□□□□ -1.69
YBX1P67809 UBE2FP1-201ENST00000416536 447 ntBASIC4.5□□□□□ -1.69
YBX1P67809 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 RPL7P37-201ENST00000425095 738 ntBASIC4.5□□□□□ -1.69
YBX1P67809 USMG5P1-201ENST00000425964 177 ntBASIC4.5□□□□□ -1.69
YBX1P67809 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
YBX1P67809 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.5□□□□□ -1.69
YBX1P67809 RPL23AP69-201ENST00000431134 458 ntBASIC4.5□□□□□ -1.69
YBX1P67809 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.5□□□□□ -1.69
YBX1P67809 MRPS18BP2-201ENST00000434310 759 ntBASIC4.5□□□□□ -1.69
YBX1P67809 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 AC016831.4-201ENST00000438302 307 ntBASIC4.5□□□□□ -1.69
YBX1P67809 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 RNU7-167P-201ENST00000459160 62 ntBASIC4.5□□□□□ -1.69
YBX1P67809 AC010326.1-201ENST00000462726 602 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RPS27AP1-201ENST00000475545 471 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RN7SL459P-201ENST00000481078 302 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RPL36AP41-201ENST00000493820 306 ntBASIC4.5□□□□□ -1.69
YBX1P67809 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.5□□□□□ -1.69
YBX1P67809 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.5□□□□□ -1.69
YBX1P67809 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.5□□□□□ -1.69
YBX1P67809 RNA5SP446-201ENST00000515955 82 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RNA5SP384-201ENST00000516615 116 ntBASIC4.5□□□□□ -1.69
YBX1P67809 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 AP006289.1-201ENST00000538089 277 ntBASIC4.5□□□□□ -1.69
YBX1P67809 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.5□□□□□ -1.69
YBX1P67809 AC233702.9-201ENST00000581528 203 ntBASIC4.5□□□□□ -1.69
YBX1P67809 AL158032.1-201ENST00000605401 106 ntBASIC4.5□□□□□ -1.69
YBX1P67809 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.5□□□□□ -1.69
YBX1P67809 AL161637.1-201ENST00000622380 412 ntBASIC4.5□□□□□ -1.69
YBX1P67809 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
YBX1P67809 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.5□□□□□ -1.69
YBX1P67809 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
YBX1P67809 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.49□□□□□ -1.69
YBX1P67809 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.49□□□□□ -1.69
YBX1P67809 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
YBX1P67809 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YBX1P67809 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YBX1P67809 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.49□□□□□ -1.69
YBX1P67809 RNU6-1284P-201ENST00000363701 100 ntBASIC4.49□□□□□ -1.69
YBX1P67809 Y_RNA.396-201ENST00000383949 103 ntBASIC4.49□□□□□ -1.69
YBX1P67809 Y_RNA.399-201ENST00000383955 105 ntBASIC4.49□□□□□ -1.69
YBX1P67809 RNU6-637P-201ENST00000384050 107 ntBASIC4.49□□□□□ -1.69
YBX1P67809 RNU6-209P-201ENST00000384118 107 ntBASIC4.49□□□□□ -1.69
YBX1P67809 RNU6-95P-201ENST00000384697 107 ntBASIC4.49□□□□□ -1.69
YBX1P67809 MIR659-201ENST00000384963 97 ntBASIC4.49□□□□□ -1.69
YBX1P67809 RNU2-23P-201ENST00000410545 195 ntBASIC4.49□□□□□ -1.69
YBX1P67809 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
YBX1P67809 RPL21P24-201ENST00000413752 448 ntBASIC4.49□□□□□ -1.69
YBX1P67809 USP9YP30-201ENST00000430729 455 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AC073264.2-201ENST00000448886 166 ntBASIC4.49□□□□□ -1.69
YBX1P67809 IFNWP4-201ENST00000453148 294 ntBASIC4.49□□□□□ -1.69
YBX1P67809 RPS23P7-201ENST00000466210 444 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AP001086.1-201ENST00000494882 321 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AC026801.1-201ENST00000497178 464 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AC016065.2-201ENST00000514530 444 ntBASIC4.49□□□□□ -1.69
YBX1P67809 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.49□□□□□ -1.69
YBX1P67809 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.49□□□□□ -1.69
YBX1P67809 AC026371.1-201ENST00000551867 419 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.49□□□□□ -1.69
YBX1P67809 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.49□□□□□ -1.69
YBX1P67809 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
YBX1P67809 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.49□□□□□ -1.69
YBX1P67809 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.49□□□□□ -1.69
YBX1P67809 AL670379.6-201ENST00000603753 252 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AL670379.1-201ENST00000604752 252 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AL670379.5-201ENST00000605253 252 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AL670379.8-201ENST00000605353 252 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AL670379.7-201ENST00000605823 252 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AC140113.4-201ENST00000622087 222 ntBASIC4.49□□□□□ -1.69
YBX1P67809 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YBX1P67809 BTBD10P1-201ENST00000549824 1352 ntBASIC4.49□□□□□ -1.69
YBX1P67809 AC074029.4-201ENST00000624796 1859 ntBASIC4.49□□□□□ -1.69
YBX1P67809 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YBX1P67809 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
YBX1P67809 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 AL136164.3-201ENST00000624429 3978 ntBASIC4.48□□□□□ -1.69
YBX1P67809 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.48□□□□□ -1.69
YBX1P67809 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
YBX1P67809 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
YBX1P67809 AC021146.4-201ENST00000309229 279 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AC079741.1-201ENST00000321498 212 ntBASIC4.48□□□□□ -1.69
YBX1P67809 RNU6-874P-201ENST00000362390 105 ntBASIC4.48□□□□□ -1.69
YBX1P67809 SNORD62.1-201ENST00000362541 86 ntBASIC4.48□□□□□ -1.69
YBX1P67809 RNU1-20P-201ENST00000363314 162 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms