Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RPL32P28-201ENST00000443577 397 ntBASIC2.38□□□□□ -2.03
VSX2P58304 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AL513328.1-201ENST00000446460 224 ntBASIC2.38□□□□□ -2.03
VSX2P58304 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.38□□□□□ -2.03
VSX2P58304 MTATP6P14-201ENST00000455189 673 ntBASIC2.38□□□□□ -2.03
VSX2P58304 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.38□□□□□ -2.03
VSX2P58304 AC126182.1-201ENST00000478134 357 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AL135752.1-201ENST00000479477 471 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VSX2P58304 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.38□□□□□ -2.03
VSX2P58304 AL359273.1-201ENST00000510918 627 ntBASIC2.38□□□□□ -2.03
VSX2P58304 RAC1P5-201ENST00000512182 576 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AC022483.1-201ENST00000514020 567 ntBASIC2.38□□□□□ -2.03
VSX2P58304 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VSX2P58304 AC010376.1-201ENST00000522101 334 ntBASIC2.38□□□□□ -2.03
VSX2P58304 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.38□□□□□ -2.03
VSX2P58304 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VSX2P58304 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.38□□□□□ -2.03
VSX2P58304 AL355596.1-201ENST00000565399 3996 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.38□□□□□ -2.03
VSX2P58304 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.38□□□□□ -2.03
VSX2P58304 AC009163.5-201ENST00000575421 637 ntBASIC2.38□□□□□ -2.03
VSX2P58304 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
VSX2P58304 DUXAP3-201ENST00000603616 594 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AC004067.1-201ENST00000608733 700 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AL121652.1-201ENST00000608851 448 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AC013412.1-201ENST00000610687 192 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AC008443.7-201ENST00000622195 246 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AL049777.1-201ENST00000622740 518 ntBASIC2.38□□□□□ -2.03
VSX2P58304 AC231657.1-201ENST00000624313 397 ntBASIC2.38□□□□□ -2.03
VSX2P58304 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VSX2P58304 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.38□□□□□ -2.03
VSX2P58304 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
VSX2P58304 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VSX2P58304 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VSX2P58304 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VSX2P58304 RNU5E-8P-201ENST00000363502 116 ntBASIC2.37□□□□□ -2.03
VSX2P58304 RNU5E-10P-201ENST00000363506 118 ntBASIC2.37□□□□□ -2.03
VSX2P58304 SNORD116.1-201ENST00000365628 92 ntBASIC2.37□□□□□ -2.03
VSX2P58304 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VSX2P58304 SNORA36C-201ENST00000384289 132 ntBASIC2.37□□□□□ -2.03
VSX2P58304 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VSX2P58304 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.37□□□□□ -2.03
VSX2P58304 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC018630.2-202ENST00000422992 927 ntBASIC2.37□□□□□ -2.03
VSX2P58304 PPP1R11P2-201ENST00000423543 382 ntBASIC2.37□□□□□ -2.03
VSX2P58304 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.37□□□□□ -2.03
VSX2P58304 AL035407.1-201ENST00000429211 571 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC104389.3-201ENST00000445629 235 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.37□□□□□ -2.03
VSX2P58304 AC002381.1-201ENST00000447049 280 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC009961.3-201ENST00000449832 765 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VSX2P58304 snoU13.28-201ENST00000459235 104 ntBASIC2.37□□□□□ -2.03
VSX2P58304 HSPE1P6-201ENST00000479457 291 ntBASIC2.37□□□□□ -2.03
VSX2P58304 HMGB1P36-201ENST00000487709 576 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AL049874.1-201ENST00000489560 388 ntBASIC2.37□□□□□ -2.03
VSX2P58304 RPS27P27-201ENST00000498779 255 ntBASIC2.37□□□□□ -2.03
VSX2P58304 CDC42P4-201ENST00000510507 563 ntBASIC2.37□□□□□ -2.03
VSX2P58304 RNU6-714P-201ENST00000516963 103 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.37□□□□□ -2.03
VSX2P58304 OR7K1P-201ENST00000546439 926 ntBASIC2.37□□□□□ -2.03
VSX2P58304 ACTR3BP3-201ENST00000565577 979 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC090615.1-201ENST00000577519 154 ntBASIC2.37□□□□□ -2.03
VSX2P58304 MIR3609-201ENST00000582661 80 ntBASIC2.37□□□□□ -2.03
VSX2P58304 BNIP3P26-201ENST00000600827 554 ntBASIC2.37□□□□□ -2.03
VSX2P58304 DUXAP10-204ENST00000612052 616 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC104237.2-201ENST00000612456 443 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC002550.2-201ENST00000621246 394 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AL445264.1-201ENST00000621719 171 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC009269.6-201ENST00000621778 588 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.37□□□□□ -2.03
VSX2P58304 OR1S1-201ENST00000624470 978 ntBASIC2.37□□□□□ -2.03
VSX2P58304 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.37□□□□□ -2.03
VSX2P58304 OR5H6-203ENST00000642105 978 ntBASIC2.37□□□□□ -2.03
VSX2P58304 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VSX2P58304 ZNF271P-202ENST00000465539 1970 ntBASIC2.37□□□□□ -2.03
VSX2P58304 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VSX2P58304 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VSX2P58304 AL356473.1-201ENST00000406203 1408 ntBASIC2.36□□□□□ -2.03
VSX2P58304 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VSX2P58304 MIR6073-201ENST00000352083 89 ntBASIC2.36□□□□□ -2.03
VSX2P58304 Y_RNA.234-201ENST00000364409 97 ntBASIC2.36□□□□□ -2.03
VSX2P58304 RNU1-138P-201ENST00000384093 164 ntBASIC2.36□□□□□ -2.03
VSX2P58304 MIR518C-201ENST00000384822 101 ntBASIC2.36□□□□□ -2.03
VSX2P58304 MIR627-201ENST00000384979 97 ntBASIC2.36□□□□□ -2.03
VSX2P58304 MIR122-201ENST00000385044 85 ntBASIC2.36□□□□□ -2.03
VSX2P58304 RPL23AP29-201ENST00000397284 453 ntBASIC2.36□□□□□ -2.03
VSX2P58304 RNA5SP508-201ENST00000411327 119 ntBASIC2.36□□□□□ -2.03
VSX2P58304 TIMM9P2-201ENST00000419324 266 ntBASIC2.36□□□□□ -2.03
VSX2P58304 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.36□□□□□ -2.03
VSX2P58304 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.36□□□□□ -2.03
VSX2P58304 RPL7P37-201ENST00000425095 738 ntBASIC2.36□□□□□ -2.03
VSX2P58304 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.36□□□□□ -2.03
VSX2P58304 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.36□□□□□ -2.03
VSX2P58304 MTND5P14-201ENST00000441481 1267 ntBASIC2.36□□□□□ -2.03
VSX2P58304 RPL7P36-201ENST00000444633 681 ntBASIC2.36□□□□□ -2.03
VSX2P58304 MTND1P31-201ENST00000449206 961 ntBASIC2.36□□□□□ -2.03
VSX2P58304 ZNF886P-201ENST00000450781 723 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms