Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.03□□□□□ -1.92
PEX3P56589 MTCO3P12-201ENST00000416718 547 ntBASIC3.03□□□□□ -1.92
PEX3P56589 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.03□□□□□ -1.92
PEX3P56589 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.03□□□□□ -1.92
PEX3P56589 MTND2P18-201ENST00000419962 1030 ntBASIC3.03□□□□□ -1.92
PEX3P56589 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.03□□□□□ -1.92
PEX3P56589 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.03□□□□□ -1.92
PEX3P56589 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.03□□□□□ -1.92
PEX3P56589 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.03□□□□□ -1.92
PEX3P56589 RPL36AP33-201ENST00000450395 310 ntBASIC3.03□□□□□ -1.92
PEX3P56589 AC093392.2-201ENST00000450682 337 ntBASIC3.03□□□□□ -1.92
PEX3P56589 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.03□□□□□ -1.92
PEX3P56589 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.03□□□□□ -1.92
PEX3P56589 snoU13.8-201ENST00000458890 104 ntBASIC3.03□□□□□ -1.92
PEX3P56589 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.03□□□□□ -1.92
PEX3P56589 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.03□□□□□ -1.92
PEX3P56589 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.03□□□□□ -1.92
PEX3P56589 MTND2P38-201ENST00000522536 667 ntBASIC3.03□□□□□ -1.92
PEX3P56589 AC007954.1-201ENST00000554198 494 ntBASIC3.03□□□□□ -1.92
PEX3P56589 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.03□□□□□ -1.92
PEX3P56589 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.03□□□□□ -1.92
PEX3P56589 AC010653.1-201ENST00000571108 881 ntBASIC3.03□□□□□ -1.92
PEX3P56589 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.03□□□□□ -1.92
PEX3P56589 WISP1-OT1-201ENST00000602893 642 ntBASIC3.03□□□□□ -1.92
PEX3P56589 ATP1B3P1-201ENST00000605365 821 ntBASIC3.03□□□□□ -1.92
PEX3P56589 AC005046.1-201ENST00000608515 625 ntBASIC3.03□□□□□ -1.92
PEX3P56589 MIR7844-201ENST00000616161 122 ntBASIC3.03□□□□□ -1.92
PEX3P56589 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.03□□□□□ -1.92
PEX3P56589 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.03□□□□□ -1.92
PEX3P56589 AC092192.1-201ENST00000633154 1018 ntBASIC3.03□□□□□ -1.92
PEX3P56589 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.03□□□□□ -1.92
PEX3P56589 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.92
PEX3P56589 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PEX3P56589 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PEX3P56589 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PEX3P56589 MTND4P16-201ENST00000466108 1367 ntBASIC3.02□□□□□ -1.93
PEX3P56589 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.02□□□□□ -1.93
PEX3P56589 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.02□□□□□ -1.93
PEX3P56589 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.02□□□□□ -1.93
PEX3P56589 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PEX3P56589 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PEX3P56589 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.02□□□□□ -1.93
PEX3P56589 RNA5SP344-201ENST00000411081 104 ntBASIC3.02□□□□□ -1.93
PEX3P56589 BEND7P1-201ENST00000422058 457 ntBASIC3.02□□□□□ -1.93
PEX3P56589 MTCO1P39-201ENST00000426148 480 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.02□□□□□ -1.93
PEX3P56589 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.02□□□□□ -1.93
PEX3P56589 VDAC1P3-201ENST00000434069 851 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.02□□□□□ -1.93
PEX3P56589 AL662791.1-201ENST00000441992 928 ntBASIC3.02□□□□□ -1.93
PEX3P56589 PAXBP1P1-201ENST00000449315 447 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AC021382.1-201ENST00000483523 359 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AC109486.1-201ENST00000486833 374 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AL024509.2-201ENST00000493462 493 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AC106872.3-201ENST00000495104 446 ntBASIC3.02□□□□□ -1.93
PEX3P56589 VN1R104P-201ENST00000505115 1009 ntBASIC3.02□□□□□ -1.93
PEX3P56589 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.02□□□□□ -1.93
PEX3P56589 RNU6-1073P-201ENST00000517182 106 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.02□□□□□ -1.93
PEX3P56589 AC087373.1-201ENST00000524920 491 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AP004247.1-201ENST00000531556 1289 ntBASIC3.02□□□□□ -1.93
PEX3P56589 OSBPL9P5-201ENST00000542581 171 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AC109446.2-201ENST00000567872 497 ntBASIC3.02□□□□□ -1.93
PEX3P56589 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.02□□□□□ -1.93
PEX3P56589 VIS1.1-201ENST00000610517 203 ntBASIC3.02□□□□□ -1.93
PEX3P56589 AL590099.1-201ENST00000615276 138 ntBASIC3.02□□□□□ -1.93
PEX3P56589 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PEX3P56589 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
PEX3P56589 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.01□□□□□ -1.93
PEX3P56589 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PEX3P56589 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PEX3P56589 FRG1BP-201ENST00000278882 761 ntBASIC3.01□□□□□ -1.93
PEX3P56589 SNORA5B-201ENST00000363786 132 ntBASIC3.01□□□□□ -1.93
PEX3P56589 RNU6-1074P-201ENST00000383995 104 ntBASIC3.01□□□□□ -1.93
PEX3P56589 RNU6-882P-201ENST00000391025 103 ntBASIC3.01□□□□□ -1.93
PEX3P56589 MIR320C1-201ENST00000408566 88 ntBASIC3.01□□□□□ -1.93
PEX3P56589 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PEX3P56589 RNA5SP21-201ENST00000410917 96 ntBASIC3.01□□□□□ -1.93
PEX3P56589 MTCO1P17-201ENST00000411522 491 ntBASIC3.01□□□□□ -1.93
PEX3P56589 SSXP9-201ENST00000417503 292 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AL137014.1-201ENST00000420490 1226 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AC234781.2-201ENST00000426370 994 ntBASIC3.01□□□□□ -1.93
PEX3P56589 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.01□□□□□ -1.93
PEX3P56589 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.01□□□□□ -1.93
PEX3P56589 AC112220.1-201ENST00000434628 355 ntBASIC3.01□□□□□ -1.93
PEX3P56589 HIGD1AP11-201ENST00000438361 280 ntBASIC3.01□□□□□ -1.93
PEX3P56589 RPL21P2-201ENST00000440049 481 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.01□□□□□ -1.93
PEX3P56589 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.01□□□□□ -1.93
PEX3P56589 VN1R17P-201ENST00000472048 1090 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AC072039.1-201ENST00000477611 581 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.01□□□□□ -1.93
PEX3P56589 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
PEX3P56589 FAM172BP-201ENST00000487497 1089 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.01□□□□□ -1.93
PEX3P56589 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.01□□□□□ -1.93
PEX3P56589 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.01□□□□□ -1.93
PEX3P56589 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.01□□□□□ -1.93
PEX3P56589 AC013828.2-201ENST00000532487 235 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms