Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC008121.3-201ENST00000618726 433 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 PLCE1P1-201ENST00000622094 305 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AC015871.5-202ENST00000623252 701 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AC092608.2-201ENST00000624427 218 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
GFRA1P56159 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
GFRA1P56159 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
GFRA1P56159 SMG1P4-204ENST00000523028 4131 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GFRA1P56159 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.3□□□□□ -1.72
GFRA1P56159 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.3□□□□□ -1.72
GFRA1P56159 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.3□□□□□ -1.72
GFRA1P56159 RNU6-1115P-201ENST00000362490 106 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 Y_RNA.33-201ENST00000362591 102 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 RNU6-1329P-201ENST00000365664 107 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 RNU6-306P-201ENST00000384617 107 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 MIR192-201ENST00000384915 110 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 SNORA75.6-201ENST00000391318 127 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 MIR298-201ENST00000401212 88 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 U3.35-201ENST00000408405 208 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 NDUFB4P7-201ENST00000423198 363 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 RANP8-201ENST00000444720 713 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.3□□□□□ -1.72
GFRA1P56159 RPL7P5-201ENST00000471472 736 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 RPL7P42-201ENST00000481005 679 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 AL160314.1-201ENST00000490836 438 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 Vault.1-201ENST00000516474 102 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 RNU6-307P-201ENST00000516743 106 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 RNU6-1073P-201ENST00000517182 106 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 AP006289.1-201ENST00000538089 277 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.3□□□□□ -1.72
GFRA1P56159 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.3□□□□□ -1.72
GFRA1P56159 AL352979.3-201ENST00000553515 247 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 AC093249.4-201ENST00000564755 259 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.3□□□□□ -1.72
GFRA1P56159 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.3□□□□□ -1.72
GFRA1P56159 ELOCP5-201ENST00000604924 333 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
GFRA1P56159 AC083806.3-201ENST00000614016 455 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
GFRA1P56159 ZFRP1-201ENST00000457579 2970 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 AC008079.2-201ENST00000623543 20396 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.3□□□□□ -1.72
GFRA1P56159 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GFRA1P56159 AC100778.3-201ENST00000580060 1750 ntBASIC4.3□□□□□ -1.72
GFRA1P56159 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA1P56159 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA1P56159 AL731532.2-201ENST00000623542 1953 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA1P56159 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 Y_RNA.245-201ENST00000364493 95 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 CYP4F29P-201ENST00000420685 446 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 EIF4EP1-201ENST00000422311 642 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 AL158156.1-201ENST00000422509 473 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 AC097713.2-201ENST00000430199 356 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.29□□□□□ -1.72
GFRA1P56159 RPS24P13-201ENST00000442520 397 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.29□□□□□ -1.72
GFRA1P56159 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.29□□□□□ -1.72
GFRA1P56159 SNORD5.1-201ENST00000458800 75 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 AC010326.1-201ENST00000462726 602 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 SNORA31.8-201ENST00000516327 108 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 AF186190.1-201ENST00000517470 480 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.29□□□□□ -1.72
GFRA1P56159 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 SNORD39.4-201ENST00000620099 78 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 MIR7703-201ENST00000620784 77 ntBASIC4.29□□□□□ -1.72
GFRA1P56159 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.29□□□□□ -1.72
GFRA1P56159 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.29□□□□□ -1.72
GFRA1P56159 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.29□□□□□ -1.72
GFRA1P56159 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA1P56159 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA1P56159 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.29□□□□□ -1.72
GFRA1P56159 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
GFRA1P56159 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
GFRA1P56159 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms