Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MIR27B-201ENST00000385129 97 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AL512633.1-201ENST00000399931 655 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AL356131.1-201ENST00000405826 414 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS2P54868 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS2P54868 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS2P54868 AL590233.1-201ENST00000430017 456 ntBASIC3□□□□□ -1.93
HMGCS2P54868 MTND1P20-201ENST00000430341 950 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3□□□□□ -1.93
HMGCS2P54868 HIGD1AP11-201ENST00000438361 280 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AL117351.1-201ENST00000438864 766 ntBASIC3□□□□□ -1.93
HMGCS2P54868 OR6K1P-201ENST00000456766 971 ntBASIC3□□□□□ -1.93
HMGCS2P54868 ARPC3P2-201ENST00000457786 533 ntBASIC3□□□□□ -1.93
HMGCS2P54868 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
HMGCS2P54868 AP002884.2-201ENST00000471647 395 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3□□□□□ -1.93
HMGCS2P54868 SNORA9.3-201ENST00000516383 129 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS2P54868 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3□□□□□ -1.93
HMGCS2P54868 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3□□□□□ -1.93
HMGCS2P54868 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGCS2P54868 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS2P54868 AC068313.1-201ENST00000604028 1008 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AC072039.2-201ENST00000608883 439 ntBASIC3□□□□□ -1.93
HMGCS2P54868 TUG1_1.1-201ENST00000610654 145 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AC040168.1-201ENST00000623594 991 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AC079248.2-201ENST00000623779 326 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AC091925.2-201ENST00000625059 256 ntBASIC3□□□□□ -1.93
HMGCS2P54868 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3□□□□□ -1.93
HMGCS2P54868 AL355596.1-201ENST00000565399 3996 ntBASIC3□□□□□ -1.93
HMGCS2P54868 ZNF658B-202ENST00000615961 3375 ntBASIC3□□□□□ -1.93
HMGCS2P54868 AC092326.2-201ENST00000624772 1561 ntBASIC3□□□□□ -1.93
HMGCS2P54868 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCS2P54868 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HMGCS2P54868 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HMGCS2P54868 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HMGCS2P54868 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HMGCS2P54868 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGCS2P54868 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGCS2P54868 RNU6-878P-201ENST00000384578 110 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC109780.2-201ENST00000413467 845 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGCS2P54868 USP9YP26-201ENST00000421008 661 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGCS2P54868 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGCS2P54868 SNRPEP4-201ENST00000435815 279 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 MTND5P14-201ENST00000441481 1267 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 ARPC3P5-201ENST00000448802 534 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGCS2P54868 OR6C5P-201ENST00000452388 923 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC104308.1-201ENST00000454621 333 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGCS2P54868 RPS20P24-201ENST00000457473 361 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 RNU7-125P-201ENST00000458760 62 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 MEMO1P3-201ENST00000459811 302 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 HMGN2P13-201ENST00000476476 274 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC104685.1-201ENST00000502445 371 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGCS2P54868 RNU6-27P-201ENST00000516146 107 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC100870.1-201ENST00000522035 505 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGCS2P54868 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGCS2P54868 AC128657.1-201ENST00000549459 145 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGCS2P54868 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGCS2P54868 AC136618.2-201ENST00000575091 400 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AP000811.1-201ENST00000603803 651 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC080013.4-201ENST00000607624 649 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC099778.2-201ENST00000610904 211 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC006329.2-201ENST00000611491 394 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AL110115.1-201ENST00000614396 364 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 U4.3-201ENST00000621047 82 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AL445264.1-201ENST00000621719 171 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AL360181.4-201ENST00000621752 134 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC095031.1-201ENST00000623685 672 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 SNORA50A-202ENST00000629536 136 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGCS2P54868 AC087359.1-201ENST00000508335 1740 ntBASIC2.99□□□□□ -1.93
HMGCS2P54868 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HMGCS2P54868 AC011477.1-204ENST00000623416 1325 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HMGCS2P54868 SNORD114-30-201ENST00000364448 72 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 SNORD116-8-201ENST00000384365 95 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGCS2P54868 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGCS2P54868 MTCYBP45-201ENST00000435243 565 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGCS2P54868 MUPP-201ENST00000438111 566 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 MTCO1P27-201ENST00000448269 226 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 RPL23AP35-201ENST00000451906 501 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 BX322784.1-201ENST00000455793 1077 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 SUMO2P2-201ENST00000456482 255 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HMGCS2P54868 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGCS2P54868 TXNP6-201ENST00000510190 310 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGCS2P54868 MTCYBP43-201ENST00000513621 740 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms