Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RNU1-108P-201ENST00000362556 161 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 RNA5SP258-201ENST00000362750 119 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 Y_RNA.86-201ENST00000363020 111 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 Y_RNA.452-201ENST00000384202 108 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 MIR559-201ENST00000385188 96 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 RPS7P15-201ENST00000415804 584 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AC114482.1-201ENST00000418010 247 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 MTCO1P20-201ENST00000425366 358 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AL589872.1-201ENST00000426602 288 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 PSMA6P3-201ENST00000428242 164 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.28□□□□□ -1.72
ATXN1P54253 RAD23BP3-201ENST00000454157 1152 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 HMGB1P30-201ENST00000492455 606 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.28□□□□□ -1.72
ATXN1P54253 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.28□□□□□ -1.72
ATXN1P54253 AC026801.2-201ENST00000515352 425 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 RNU6-1137P-201ENST00000517073 99 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 RNU6-201P-201ENST00000517100 61 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AC022616.6-201ENST00000520479 119 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.28□□□□□ -1.72
ATXN1P54253 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.28□□□□□ -1.72
ATXN1P54253 AC245014.2-201ENST00000603689 287 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 SNRPGP17-201ENST00000603780 214 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AC246785.4-201ENST00000605374 287 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 OR10AB1P-201ENST00000609613 938 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.28□□□□□ -1.72
ATXN1P54253 AC040168.1-201ENST00000623594 991 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 SCARNA15.3-201ENST00000626315 122 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 SCARNA4.1-201ENST00000628597 123 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AC134503.1-201ENST00000633048 54 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 AC010149.2-201ENST00000637608 315 ntBASIC4.28□□□□□ -1.72
ATXN1P54253 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATXN1P54253 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATXN1P54253 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.28□□□□□ -1.72
ATXN1P54253 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATXN1P54253 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
ATXN1P54253 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATXN1P54253 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.27□□□□□ -1.73
ATXN1P54253 AC016588.2-201ENST00000632484 3021 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 AC092125.1-201ENST00000562568 1995 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.27□□□□□ -1.73
ATXN1P54253 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.27□□□□□ -1.73
ATXN1P54253 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
ATXN1P54253 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
ATXN1P54253 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATXN1P54253 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATXN1P54253 MIR607-201ENST00000385241 96 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 MIR513A2-201ENST00000385249 127 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ATXN1P54253 MTCO3P40-201ENST00000392516 676 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 RNU4-55P-201ENST00000410731 137 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATXN1P54253 AL731563.1-201ENST00000442202 214 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
ATXN1P54253 FABP3P2-201ENST00000453169 399 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 AC007967.1-201ENST00000455422 1159 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 RPL38P1-201ENST00000460914 211 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 RN7SL585P-201ENST00000470538 280 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 AC006517.1-201ENST00000480485 328 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 HMGB1P29-201ENST00000505659 499 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 AC010493.1-201ENST00000513479 292 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 RNU7-143P-201ENST00000516781 65 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 AC105029.1-201ENST00000520250 669 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.27□□□□□ -1.73
ATXN1P54253 AP003181.2-201ENST00000528941 181 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 OR5D17P-201ENST00000531492 978 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.27□□□□□ -1.73
ATXN1P54253 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.27□□□□□ -1.73
ATXN1P54253 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.27□□□□□ -1.73
ATXN1P54253 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.27□□□□□ -1.73
ATXN1P54253 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.27□□□□□ -1.73
ATXN1P54253 AC011468.4-201ENST00000603942 409 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.27□□□□□ -1.73
ATXN1P54253 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.27□□□□□ -1.73
ATXN1P54253 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
ATXN1P54253 MIR1302-1-201ENST00000637932 143 ntBASIC4.27□□□□□ -1.73
ATXN1P54253 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
ATXN1P54253 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.27□□□□□ -1.73
ATXN1P54253 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATXN1P54253 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
ATXN1P54253 MTND5P27-201ENST00000428871 1720 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATXN1P54253 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
ATXN1P54253 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ATXN1P54253 AC024560.2-201ENST00000507981 1497 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.26□□□□□ -1.73
ATXN1P54253 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATXN1P54253 AC007685.1-201ENST00000329806 452 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATXN1P54253 RNA5SP502-201ENST00000362694 119 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 RNU6-1249P-201ENST00000363237 111 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 SNORA51.2-201ENST00000364595 132 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.26□□□□□ -1.73
ATXN1P54253 Y_RNA.409-201ENST00000383990 98 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 RNU6-209P-201ENST00000384118 107 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 RNU6-1181P-201ENST00000384191 106 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.26□□□□□ -1.73
ATXN1P54253 MRPL42P2-201ENST00000403169 426 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 LAP3P1-201ENST00000403648 294 ntBASIC4.26□□□□□ -1.73
ATXN1P54253 RNU2-8P-201ENST00000410727 190 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms