Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COPAP53621 AL136097.1-201ENST00000456945 913 ntBASIC3.98□□□□□ -1.77
COPAP53621 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.98□□□□□ -1.77
COPAP53621 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.98□□□□□ -1.77
COPAP53621 MTAPP1-201ENST00000489154 819 ntBASIC3.98□□□□□ -1.77
COPAP53621 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.98□□□□□ -1.77
COPAP53621 AC105914.1-201ENST00000511798 226 ntBASIC3.98□□□□□ -1.77
COPAP53621 ARL2BPP6-201ENST00000512757 439 ntBASIC3.98□□□□□ -1.77
COPAP53621 RNU2-10P-201ENST00000516375 211 ntBASIC3.98□□□□□ -1.77
COPAP53621 RNU6-840P-201ENST00000517275 65 ntBASIC3.98□□□□□ -1.77
COPAP53621 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.98□□□□□ -1.77
COPAP53621 FAM60DP-201ENST00000524174 632 ntBASIC3.98□□□□□ -1.77
COPAP53621 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COPAP53621 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.98□□□□□ -1.77
COPAP53621 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COPAP53621 SNRPGP16-201ENST00000533275 226 ntBASIC3.98□□□□□ -1.77
COPAP53621 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COPAP53621 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.98□□□□□ -1.77
COPAP53621 AC128657.1-201ENST00000549459 145 ntBASIC3.98□□□□□ -1.77
COPAP53621 HMGB1P33-201ENST00000563485 527 ntBASIC3.98□□□□□ -1.77
COPAP53621 AC022968.1-201ENST00000567372 442 ntBASIC3.98□□□□□ -1.77
COPAP53621 AC087499.8-201ENST00000578406 226 ntBASIC3.98□□□□□ -1.77
COPAP53621 AP001029.3-201ENST00000588063 596 ntBASIC3.98□□□□□ -1.77
COPAP53621 AC012443.1-201ENST00000605605 231 ntBASIC3.98□□□□□ -1.77
COPAP53621 AL356321.1-201ENST00000621360 228 ntBASIC3.98□□□□□ -1.77
COPAP53621 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.98□□□□□ -1.77
COPAP53621 MIR4275-201ENST00000636486 87 ntBASIC3.98□□□□□ -1.77
COPAP53621 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.98□□□□□ -1.77
COPAP53621 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.98□□□□□ -1.77
COPAP53621 AC092326.2-201ENST00000624772 1561 ntBASIC3.97□□□□□ -1.77
COPAP53621 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.97□□□□□ -1.77
COPAP53621 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.97□□□□□ -1.77
COPAP53621 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COPAP53621 RNU1-18P-201ENST00000363062 164 ntBASIC3.97□□□□□ -1.77
COPAP53621 RNU6-1085P-201ENST00000363576 107 ntBASIC3.97□□□□□ -1.77
COPAP53621 RNU6-76P-201ENST00000384060 104 ntBASIC3.97□□□□□ -1.77
COPAP53621 Y_RNA.450-201ENST00000384198 113 ntBASIC3.97□□□□□ -1.77
COPAP53621 HMGN2P8-201ENST00000391458 268 ntBASIC3.97□□□□□ -1.77
COPAP53621 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.97□□□□□ -1.77
COPAP53621 RNA5SP44-201ENST00000410446 133 ntBASIC3.97□□□□□ -1.77
COPAP53621 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.97□□□□□ -1.77
COPAP53621 ARF4P2-201ENST00000430209 526 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC016696.1-201ENST00000446949 318 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC006480.1-201ENST00000449887 378 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC140076.1-201ENST00000449897 361 ntBASIC3.97□□□□□ -1.77
COPAP53621 RPL23AP31-201ENST00000456160 467 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.97□□□□□ -1.77
COPAP53621 RN7SL93P-201ENST00000463035 293 ntBASIC3.97□□□□□ -1.77
COPAP53621 RN7SL330P-201ENST00000469709 307 ntBASIC3.97□□□□□ -1.77
COPAP53621 RPL7L1P8-201ENST00000469911 741 ntBASIC3.97□□□□□ -1.77
COPAP53621 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.97□□□□□ -1.77
COPAP53621 AC019235.1-201ENST00000503847 207 ntBASIC3.97□□□□□ -1.77
COPAP53621 RNU6-390P-201ENST00000516259 103 ntBASIC3.97□□□□□ -1.77
COPAP53621 SCARNA14-201ENST00000516903 136 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC087369.1-201ENST00000520775 996 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC134698.4-201ENST00000523451 826 ntBASIC3.97□□□□□ -1.77
COPAP53621 OR5AQ1P-201ENST00000527596 927 ntBASIC3.97□□□□□ -1.77
COPAP53621 AP003034.1-201ENST00000534621 422 ntBASIC3.97□□□□□ -1.77
COPAP53621 RPL21P12-201ENST00000559810 515 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.97□□□□□ -1.77
COPAP53621 MIR4474-201ENST00000579189 78 ntBASIC3.97□□□□□ -1.77
COPAP53621 AP001330.4-201ENST00000604350 154 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.97□□□□□ -1.77
COPAP53621 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.97□□□□□ -1.77
COPAP53621 AC007014.2-201ENST00000615581 479 ntBASIC3.97□□□□□ -1.77
COPAP53621 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.97□□□□□ -1.77
COPAP53621 AC139792.3-201ENST00000623525 224 ntBASIC3.97□□□□□ -1.77
COPAP53621 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COPAP53621 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
COPAP53621 AC009812.4-201ENST00000569134 1805 ntBASIC3.97□□□□□ -1.77
COPAP53621 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
COPAP53621 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COPAP53621 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COPAP53621 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
COPAP53621 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
COPAP53621 RPL7P26-201ENST00000333817 754 ntBASIC3.96□□□□□ -1.78
COPAP53621 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
COPAP53621 Y_RNA.402-201ENST00000383972 102 ntBASIC3.96□□□□□ -1.78
COPAP53621 Y_RNA.409-201ENST00000383990 98 ntBASIC3.96□□□□□ -1.78
COPAP53621 Y_RNA.453-201ENST00000384223 109 ntBASIC3.96□□□□□ -1.78
COPAP53621 MIR449B-201ENST00000384995 97 ntBASIC3.96□□□□□ -1.78
COPAP53621 TXNP7-201ENST00000406296 293 ntBASIC3.96□□□□□ -1.78
COPAP53621 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.96□□□□□ -1.78
COPAP53621 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.96□□□□□ -1.78
COPAP53621 MTCO2P19-201ENST00000427513 598 ntBASIC3.96□□□□□ -1.78
COPAP53621 MTATP6P4-201ENST00000427725 675 ntBASIC3.96□□□□□ -1.78
COPAP53621 ELOCP14-201ENST00000428070 331 ntBASIC3.96□□□□□ -1.78
COPAP53621 GPR143P-201ENST00000434155 205 ntBASIC3.96□□□□□ -1.78
COPAP53621 ELOCP7-201ENST00000439968 331 ntBASIC3.96□□□□□ -1.78
COPAP53621 MTND2P24-201ENST00000453434 806 ntBASIC3.96□□□□□ -1.78
COPAP53621 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.96□□□□□ -1.78
COPAP53621 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.96□□□□□ -1.78
COPAP53621 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.96□□□□□ -1.78
COPAP53621 snoU13.22-201ENST00000459428 104 ntBASIC3.96□□□□□ -1.78
COPAP53621 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.96□□□□□ -1.78
COPAP53621 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.96□□□□□ -1.78
COPAP53621 ARL4AP2-201ENST00000507378 601 ntBASIC3.96□□□□□ -1.78
COPAP53621 AC026726.1-201ENST00000512859 601 ntBASIC3.96□□□□□ -1.78
COPAP53621 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.96□□□□□ -1.78
COPAP53621 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms