Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ELOCP4-201ENST00000420090 333 ntBASIC3.92□□□□□ -1.78
COPB1P53618 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.92□□□□□ -1.78
COPB1P53618 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.92□□□□□ -1.78
COPB1P53618 AC018644.1-201ENST00000429934 551 ntBASIC3.92□□□□□ -1.78
COPB1P53618 RPL7P54-201ENST00000438336 674 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AC093156.1-201ENST00000440382 670 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.92□□□□□ -1.78
COPB1P53618 TPT1P14-201ENST00000448018 505 ntBASIC3.92□□□□□ -1.78
COPB1P53618 MTND5P20-201ENST00000448677 143 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.92□□□□□ -1.78
COPB1P53618 AC083798.1-201ENST00000472671 131 ntBASIC3.92□□□□□ -1.78
COPB1P53618 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.92□□□□□ -1.78
COPB1P53618 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.92□□□□□ -1.78
COPB1P53618 SCARNA24.1-201ENST00000516465 137 ntBASIC3.92□□□□□ -1.78
COPB1P53618 RNU6-835P-201ENST00000516974 104 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.92□□□□□ -1.78
COPB1P53618 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.92□□□□□ -1.78
COPB1P53618 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.92□□□□□ -1.78
COPB1P53618 OR8L1P-201ENST00000534005 955 ntBASIC3.92□□□□□ -1.78
COPB1P53618 OR4T1P-201ENST00000554933 911 ntBASIC3.92□□□□□ -1.78
COPB1P53618 MIR5685-201ENST00000579080 79 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AC060780.3-201ENST00000589464 80 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.92□□□□□ -1.78
COPB1P53618 AL669831.4-202ENST00000590817 238 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AL049634.3-201ENST00000604968 457 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AC103710.2-201ENST00000609912 942 ntBASIC3.92□□□□□ -1.78
COPB1P53618 FER-210ENST00000628534 558 ntTSL 5 BASIC3.92□□□□□ -1.78
COPB1P53618 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPB1P53618 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
COPB1P53618 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.92□□□□□ -1.78
COPB1P53618 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.92□□□□□ -1.78
COPB1P53618 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.92□□□□□ -1.78
COPB1P53618 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
COPB1P53618 AC066616.2-201ENST00000559334 1481 ntBASIC3.92□□□□□ -1.78
COPB1P53618 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COPB1P53618 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPB1P53618 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.91□□□□□ -1.78
COPB1P53618 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPB1P53618 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.91□□□□□ -1.78
COPB1P53618 AC058791.1-201ENST00000608412 3198 ntBASIC3.91□□□□□ -1.78
COPB1P53618 OR1S2-201ENST00000302592 978 ntBASIC3.91□□□□□ -1.78
COPB1P53618 MIR30E-201ENST00000362104 92 ntBASIC3.91□□□□□ -1.78
COPB1P53618 RNY3P13-201ENST00000365542 102 ntBASIC3.91□□□□□ -1.78
COPB1P53618 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
COPB1P53618 RNU6-74P-201ENST00000384235 107 ntBASIC3.91□□□□□ -1.78
COPB1P53618 SNORA11.1-201ENST00000408133 129 ntBASIC3.91□□□□□ -1.78
COPB1P53618 RNU2-47P-201ENST00000410649 186 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AC068533.1-201ENST00000418542 415 ntBASIC3.91□□□□□ -1.78
COPB1P53618 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.91□□□□□ -1.78
COPB1P53618 RPL23AP30-201ENST00000432419 501 ntBASIC3.91□□□□□ -1.78
COPB1P53618 GPR143P-201ENST00000434155 205 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.91□□□□□ -1.78
COPB1P53618 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.91□□□□□ -1.78
COPB1P53618 snoU13.22-201ENST00000459428 104 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.91□□□□□ -1.78
COPB1P53618 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.91□□□□□ -1.78
COPB1P53618 RNU2-27P-201ENST00000516185 142 ntBASIC3.91□□□□□ -1.78
COPB1P53618 Y_RNA.702-201ENST00000516843 96 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AP001646.1-201ENST00000527936 915 ntBASIC3.91□□□□□ -1.78
COPB1P53618 ADI1P3-201ENST00000549509 470 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.91□□□□□ -1.78
COPB1P53618 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.91□□□□□ -1.78
COPB1P53618 RN7SL703P-201ENST00000578485 302 ntBASIC3.91□□□□□ -1.78
COPB1P53618 COX6CP3-201ENST00000580869 223 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AC244505.7-201ENST00000599675 272 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AL162413.1-201ENST00000603198 110 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AC024220.1-201ENST00000603675 484 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AL035413.2-201ENST00000604801 525 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AC105429.2-201ENST00000610567 517 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.91□□□□□ -1.78
COPB1P53618 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.91□□□□□ -1.78
COPB1P53618 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.91□□□□□ -1.78
COPB1P53618 AP003122.6-201ENST00000623831 495 ntBASIC3.91□□□□□ -1.78
COPB1P53618 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.91□□□□□ -1.78
COPB1P53618 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPB1P53618 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.91□□□□□ -1.78
COPB1P53618 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPB1P53618 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COPB1P53618 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COPB1P53618 MFSD8-236ENST00000641509 4050 ntBASIC3.9□□□□□ -1.78
COPB1P53618 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COPB1P53618 MTCO1P24-201ENST00000515438 1558 ntBASIC3.9□□□□□ -1.78
COPB1P53618 PRO1804-201ENST00000623780 2050 ntBASIC3.9□□□□□ -1.78
COPB1P53618 Y_RNA.70-201ENST00000362886 110 ntBASIC3.9□□□□□ -1.79
COPB1P53618 RNY1P12-201ENST00000364251 105 ntBASIC3.9□□□□□ -1.79
COPB1P53618 Y_RNA.381-201ENST00000365666 102 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AP002088.1-201ENST00000382740 395 ntBASIC3.9□□□□□ -1.79
COPB1P53618 RNU6-877P-201ENST00000383868 107 ntBASIC3.9□□□□□ -1.79
COPB1P53618 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
COPB1P53618 RNU6-1158P-201ENST00000391167 107 ntBASIC3.9□□□□□ -1.79
COPB1P53618 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.9□□□□□ -1.79
COPB1P53618 RNA5SP44-201ENST00000410446 133 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.9□□□□□ -1.79
COPB1P53618 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.9□□□□□ -1.79
COPB1P53618 AC092447.6-201ENST00000414578 210 ntBASIC3.9□□□□□ -1.79
COPB1P53618 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.9□□□□□ -1.79
COPB1P53618 ZNF90P2-204ENST00000419323 1075 ntBASIC3.9□□□□□ -1.79
COPB1P53618 OR1AA1P-201ENST00000419597 916 ntBASIC3.9□□□□□ -1.79
COPB1P53618 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms