Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.34□□□□□ -1.39
NUBP1P53384 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
NUBP1P53384 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NUBP1P53384 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
NUBP1P53384 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NUBP1P53384 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NUBP1P53384 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUBP1P53384 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUBP1P53384 U8.6-201ENST00000364939 135 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 RNU6-294P-201ENST00000364999 102 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 Y_RNA.310-201ENST00000365063 113 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 Y_RNA.415-201ENST00000384012 112 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 RNY4P29-201ENST00000410801 97 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC6.34□□□□□ -1.39
NUBP1P53384 CYCSP49-201ENST00000420810 319 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 AC006517.1-201ENST00000480485 328 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 SNORA31.23-201ENST00000517219 133 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.34□□□□□ -1.39
NUBP1P53384 CYP4A27P-201ENST00000567218 190 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.34□□□□□ -1.39
NUBP1P53384 AC138965.3-201ENST00000623875 498 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
NUBP1P53384 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUBP1P53384 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.34□□□□□ -1.39
NUBP1P53384 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NUBP1P53384 AC022336.2-201ENST00000568966 2538 ntBASIC6.34□□□□□ -1.39
NUBP1P53384 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
NUBP1P53384 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NUBP1P53384 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.34□□□□□ -1.4
NUBP1P53384 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.34□□□□□ -1.4
NUBP1P53384 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NUBP1P53384 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NUBP1P53384 GTF2IP4-201ENST00000453092 2054 ntBASIC6.34□□□□□ -1.4
NUBP1P53384 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 AC025470.1-201ENST00000510053 2032 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.33□□□□□ -1.4
NUBP1P53384 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 SNORD58C-201ENST00000365223 64 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 Y_RNA.346-201ENST00000365385 112 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 SNORA20B-201ENST00000384220 132 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 Z82209.1-201ENST00000422141 2135 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 RN7SL826P-201ENST00000479724 288 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.33□□□□□ -1.4
NUBP1P53384 AC011471.1-201ENST00000585766 187 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NUBP1P53384 CR381572.2-201ENST00000624852 397 ntBASIC6.33□□□□□ -1.4
NUBP1P53384 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
NUBP1P53384 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUBP1P53384 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 AC004076.2-201ENST00000620532 3323 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
NUBP1P53384 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.32□□□□□ -1.4
NUBP1P53384 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NUBP1P53384 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 RNU6-249P-201ENST00000363016 102 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 RNU6-647P-201ENST00000364243 107 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 Y_RNA.243-201ENST00000364481 109 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 SNORD18B-201ENST00000365659 72 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 MIR208B-201ENST00000401172 77 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 MIR1286-201ENST00000408112 78 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 OR2AT2P-201ENST00000413438 905 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 HMGN2P30-201ENST00000423237 256 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.32□□□□□ -1.4
NUBP1P53384 SNORA70.20-201ENST00000516848 126 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC6.32□□□□□ -1.4
NUBP1P53384 AC004232.1-201ENST00000571388 208 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 MIR1269B-201ENST00000580405 75 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 MIR4505-201ENST00000582238 73 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 RN7SL475P-201ENST00000583379 298 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 AC015813.4-201ENST00000610469 179 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 uc_338.28-201ENST00000612082 187 ntBASIC6.32□□□□□ -1.4
NUBP1P53384 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.32□□□□□ -1.4
NUBP1P53384 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
NUBP1P53384 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.31□□□□□ -1.4
NUBP1P53384 AC022905.1-201ENST00000503430 3048 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms