Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-1092P-201ENST00000516955 87 ntBASIC5.14□□□□□ -1.59
USP11P51784 RNU6-685P-201ENST00000517088 95 ntBASIC5.14□□□□□ -1.59
USP11P51784 AC091178.1-203ENST00000584586 279 ntBASIC5.14□□□□□ -1.59
USP11P51784 AL355297.3-201ENST00000604082 446 ntBASIC5.14□□□□□ -1.59
USP11P51784 AL021879.1-201ENST00000611756 288 ntBASIC5.14□□□□□ -1.59
USP11P51784 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.14□□□□□ -1.59
USP11P51784 AL445363.3-201ENST00000623080 671 ntBASIC5.14□□□□□ -1.59
USP11P51784 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP11P51784 AC009229.4-201ENST00000623854 1947 ntBASIC5.14□□□□□ -1.59
USP11P51784 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP11P51784 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.14□□□□□ -1.59
USP11P51784 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP11P51784 AC103710.2-202ENST00000641454 2853 ntBASIC5.14□□□□□ -1.59
USP11P51784 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
USP11P51784 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP11P51784 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP11P51784 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP11P51784 AC093535.2-201ENST00000624769 2326 ntBASIC5.13□□□□□ -1.59
USP11P51784 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.13□□□□□ -1.59
USP11P51784 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
USP11P51784 SNORD70.1-201ENST00000391007 85 ntBASIC5.13□□□□□ -1.59
USP11P51784 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.13□□□□□ -1.59
USP11P51784 AC068287.1-201ENST00000430283 295 ntBASIC5.13□□□□□ -1.59
USP11P51784 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.13□□□□□ -1.59
USP11P51784 RPL21P112-201ENST00000434403 463 ntBASIC5.13□□□□□ -1.59
USP11P51784 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.13□□□□□ -1.59
USP11P51784 AC127537.2-201ENST00000439258 465 ntBASIC5.13□□□□□ -1.59
USP11P51784 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.13□□□□□ -1.59
USP11P51784 AC012671.1-201ENST00000451912 203 ntBASIC5.13□□□□□ -1.59
USP11P51784 snoU13.7-201ENST00000459220 104 ntBASIC5.13□□□□□ -1.59
USP11P51784 AC117503.1-201ENST00000472241 394 ntBASIC5.13□□□□□ -1.59
USP11P51784 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.13□□□□□ -1.59
USP11P51784 MTND1P19-201ENST00000511780 315 ntBASIC5.13□□□□□ -1.59
USP11P51784 RNU6-1332P-201ENST00000516666 104 ntBASIC5.13□□□□□ -1.59
USP11P51784 RNU1-54P-201ENST00000517181 120 ntBASIC5.13□□□□□ -1.59
USP11P51784 MIR4715-201ENST00000584117 79 ntBASIC5.13□□□□□ -1.59
USP11P51784 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.13□□□□□ -1.59
USP11P51784 AC008745.1-201ENST00000604064 271 ntBASIC5.13□□□□□ -1.59
USP11P51784 MIR378J-201ENST00000611988 109 ntBASIC5.13□□□□□ -1.59
USP11P51784 AL023881.1-201ENST00000621088 301 ntBASIC5.13□□□□□ -1.59
USP11P51784 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.13□□□□□ -1.59
USP11P51784 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.13□□□□□ -1.59
USP11P51784 MIR7641-1-201ENST00000627518 61 ntBASIC5.13□□□□□ -1.59
USP11P51784 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP11P51784 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP11P51784 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
USP11P51784 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP11P51784 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.13□□□□□ -1.59
USP11P51784 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 MTCO1P24-201ENST00000515438 1558 ntBASIC5.12□□□□□ -1.59
USP11P51784 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.12□□□□□ -1.59
USP11P51784 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.12□□□□□ -1.59
USP11P51784 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
USP11P51784 RNU6-95P-201ENST00000384697 107 ntBASIC5.12□□□□□ -1.59
USP11P51784 RNU2-23P-201ENST00000410545 195 ntBASIC5.12□□□□□ -1.59
USP11P51784 RNU2-15P-201ENST00000410692 191 ntBASIC5.12□□□□□ -1.59
USP11P51784 AC011933.1-201ENST00000413334 321 ntBASIC5.12□□□□□ -1.59
USP11P51784 RPL7AP25-201ENST00000423357 805 ntBASIC5.12□□□□□ -1.59
USP11P51784 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.12□□□□□ -1.59
USP11P51784 AC105402.2-201ENST00000438503 358 ntBASIC5.12□□□□□ -1.59
USP11P51784 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.12□□□□□ -1.59
USP11P51784 AC112492.4-201ENST00000456549 352 ntBASIC5.12□□□□□ -1.59
USP11P51784 HMGB3P30-201ENST00000457863 606 ntBASIC5.12□□□□□ -1.59
USP11P51784 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.12□□□□□ -1.59
USP11P51784 AC008571.1-201ENST00000467232 300 ntBASIC5.12□□□□□ -1.59
USP11P51784 RN7SL481P-201ENST00000477764 299 ntBASIC5.12□□□□□ -1.59
USP11P51784 COX7A2P2-201ENST00000505291 250 ntBASIC5.12□□□□□ -1.59
USP11P51784 RNU6-475P-201ENST00000516073 104 ntBASIC5.12□□□□□ -1.59
USP11P51784 SNORA14.1-201ENST00000516113 141 ntBASIC5.12□□□□□ -1.59
USP11P51784 RAB9BP1-201ENST00000519581 626 ntBASIC5.12□□□□□ -1.59
USP11P51784 AC131281.1-201ENST00000522984 164 ntBASIC5.12□□□□□ -1.59
USP11P51784 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.12□□□□□ -1.59
USP11P51784 AC007375.1-201ENST00000554513 578 ntBASIC5.12□□□□□ -1.59
USP11P51784 MIR5096-201ENST00000583713 70 ntBASIC5.12□□□□□ -1.59
USP11P51784 AC011494.1-201ENST00000596454 237 ntBASIC5.12□□□□□ -1.59
USP11P51784 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.12□□□□□ -1.59
USP11P51784 AL731566.2-201ENST00000618971 317 ntBASIC5.12□□□□□ -1.59
USP11P51784 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.12□□□□□ -1.59
USP11P51784 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
USP11P51784 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
USP11P51784 A2MP1-204ENST00000566278 4130 ntBASIC5.12□□□□□ -1.59
USP11P51784 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP11P51784 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.11□□□□□ -1.59
USP11P51784 AL356489.2-201ENST00000566968 3528 ntBASIC5.11□□□□□ -1.59
USP11P51784 MTND5P7-201ENST00000413558 1798 ntBASIC5.11□□□□□ -1.59
USP11P51784 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP11P51784 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.11□□□□□ -1.59
USP11P51784 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
USP11P51784 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP11P51784 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.11□□□□□ -1.59
USP11P51784 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP11P51784 Y_RNA.210-201ENST00000364161 110 ntBASIC5.11□□□□□ -1.59
USP11P51784 Y_RNA.399-201ENST00000383955 105 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms