Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.8□□□□□ -1.96
HCFC1P51610 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.8□□□□□ -1.96
HCFC1P51610 LLPHP1-201ENST00000603571 367 ntBASIC2.8□□□□□ -1.96
HCFC1P51610 AC099842.1-201ENST00000619919 596 ntBASIC2.8□□□□□ -1.96
HCFC1P51610 C2orf27A-204ENST00000623058 969 ntBASIC2.8□□□□□ -1.96
HCFC1P51610 AP006248.2-201ENST00000623309 592 ntBASIC2.8□□□□□ -1.96
HCFC1P51610 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.8□□□□□ -1.96
HCFC1P51610 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.79□□□□□ -1.96
HCFC1P51610 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HCFC1P51610 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HCFC1P51610 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HCFC1P51610 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HCFC1P51610 RNU6-28P-201ENST00000362378 107 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.79□□□□□ -1.96
HCFC1P51610 Y_RNA.548-201ENST00000384656 105 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HCFC1P51610 FCF1P9-201ENST00000412546 282 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 AC007390.1-201ENST00000415722 356 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 RPS15AP40-201ENST00000419621 391 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 OFD1P18Y-201ENST00000420889 959 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 AL445669.1-201ENST00000426743 755 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.79□□□□□ -1.96
HCFC1P51610 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.79□□□□□ -1.96
HCFC1P51610 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 TIMM9P1-201ENST00000436122 256 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.79□□□□□ -1.96
HCFC1P51610 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.79□□□□□ -1.96
HCFC1P51610 AL136380.1-201ENST00000447970 162 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.79□□□□□ -1.96
HCFC1P51610 SRRM1P2-201ENST00000464531 1192 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 AC078785.3-201ENST00000476607 425 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 RPS29P26-201ENST00000477483 171 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 KC877373.1-201ENST00000479066 408 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.79□□□□□ -1.96
HCFC1P51610 VN1R104P-201ENST00000505115 1009 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.79□□□□□ -1.96
HCFC1P51610 DEFB108A-201ENST00000530110 222 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.79□□□□□ -1.96
HCFC1P51610 AC010653.1-201ENST00000571108 881 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.79□□□□□ -1.96
HCFC1P51610 AC091965.4-201ENST00000607691 587 ntBASIC2.79□□□□□ -1.96
HCFC1P51610 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HCFC1P51610 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HCFC1P51610 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HCFC1P51610 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HCFC1P51610 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HCFC1P51610 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HCFC1P51610 MIR148B-201ENST00000362252 99 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AC016769.3-201ENST00000396562 315 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HCFC1P51610 AL672296.1-201ENST00000427780 2158 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 DNAJC19P4-201ENST00000440115 345 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.78□□□□□ -1.96
HCFC1P51610 AL359893.1-201ENST00000447628 1580 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 FTH1P25-201ENST00000447665 469 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.78□□□□□ -1.96
HCFC1P51610 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.78□□□□□ -1.96
HCFC1P51610 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.78□□□□□ -1.96
HCFC1P51610 AP003122.4-201ENST00000530980 758 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.78□□□□□ -1.96
HCFC1P51610 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.78□□□□□ -1.96
HCFC1P51610 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.78□□□□□ -1.96
HCFC1P51610 MTCO3P24-201ENST00000572729 782 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 MIR3186-201ENST00000577404 85 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.78□□□□□ -1.96
HCFC1P51610 AC245014.2-201ENST00000603689 287 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AL359999.1-201ENST00000604513 294 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AL365503.1-201ENST00000605247 905 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AC246785.4-201ENST00000605374 287 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AP003117.2-201ENST00000606010 545 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.78□□□□□ -1.96
HCFC1P51610 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HCFC1P51610 U6.98-201ENST00000637157 84 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.78□□□□□ -1.96
HCFC1P51610 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
HCFC1P51610 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HCFC1P51610 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HCFC1P51610 MTND5P26-201ENST00000426018 1752 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.78□□□□□ -1.96
HCFC1P51610 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HCFC1P51610 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
HCFC1P51610 GABPAP-201ENST00000419271 1356 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HCFC1P51610 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.78□□□□□ -1.96
HCFC1P51610 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 U8.3-201ENST00000363321 132 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 RNU4-1-201ENST00000363925 141 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 SNORA18.3-201ENST00000384122 132 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 RNU6-1103P-201ENST00000384150 107 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 Y_RNA.493-201ENST00000384422 102 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 RNU6-809P-201ENST00000384461 107 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 U3.29-201ENST00000391296 212 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 RNU2-62P-201ENST00000410868 191 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AC126124.2-201ENST00000413542 321 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 RPL30P2-201ENST00000414021 291 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 UBE2V1P10-201ENST00000414685 269 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.78□□□□□ -1.96
HCFC1P51610 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HCFC1P51610 BEND7P1-201ENST00000422058 457 ntBASIC2.78□□□□□ -1.96
HCFC1P51610 USP9YP14-201ENST00000430663 563 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms